Transcript Information: S_Transcript_104236.p2


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.4158281442997
Replicate 20.11491036227872
Replicate 30.096055917102086
Condition 2: 8 Hour
Replicate 10
Replicate 20.34956013499573
Replicate 30.11102003960928
Condition 3: 24 Hour
Replicate 10
Replicate 20.11804068529348
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104236.p2 GENE.S_Transcript_104236~~S_Transcript_104236.p2 ORF type:complete len:192 (-),score=23.85,gag_pre-integrs|PF13976.2|1.6e-16 S_Transcript_104236:2581-3156(-)
ATGGGCAATGATACTCAATGTAAAGTTGTCGGTCGAGGTACAATTAAAATCAAGACCCATGATGGAGTTGTAAGGACATTGACATGTGTCAGACATGTCCCTGATTTGAAACGGAATCTCATTTCTTTAGGCACCTTTGAATCTCATGGGTGCAAGAAGGTGTCCAAAGGAGCTCTTGTATTACTAAAGGCAATTCGATCTGGTAGTCTCTATGTGCTGCAGGGTTCAACTATAACAGGTTTTGCAGCTGTCGCCTCATCCAACAATGACGACACCAAGTTGTTGCATATGAGATTAGGCCACATGAGTGAGAAGGGAATCCAAATCCTCAAGAAGAAGGGTCATCTTGGTAACCATTGTACCGGTAAGGTTGATTTCTGCGAACATTGCATCTTTGGTAAGCAGAAGAAAGTCAGCTTTTCTAAAGCAGTCCACAGAACCAAAAGTACTCTGGATTACATTCATTCGGATCTTTGGGCTCCATCGAAAGTTCCTTCTAAAGGAAAATGTCATTATATGCTGACTATAATTGATGATTTCTCACGAAAAATCTGGCTTTATTTTCTCAAAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104236.p2 GENE.S_Transcript_104236~~S_Transcript_104236.p2 ORF type:complete len:192 (-),score=23.85,gag_pre-integrs|PF13976.2|1.6e-16 S_Transcript_104236:2581-3156(-)
MGNDTQCKVVGRGTIKIKTHDGVVRTLTCVRHVPDLKRNLISLGTFESHGCKKVSKGALVLLKAIRSGSLYVLQGSTITGFAAVASSNNDDTKLLHMRLGHMSEKGIQILKKKGHLGNHCTGKVDFCEHCIFGKQKKVSFSKAVHRTKSTLDYIHSDLWAPSKVPSKGKCHYMLTIIDDFSRKIWLYFLKA*

Click here to download the sequence:
Link to NCBI Protein BLAST