Transcript Information: S_Transcript_104238.p5


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value0.0004
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.45964144911489
Replicate 30.38422366840834
Condition 2: 8 Hour
Replicate 10.22213948247014
Replicate 20
Replicate 30.22204007921856
Condition 3: 24 Hour
Replicate 10.68265260908107
Replicate 21.4164882235217
Replicate 30.52545925843992


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104238.p5 GENE.S_Transcript_104238~~S_Transcript_104238.p5 ORF type:complete len:96 (-),score=15.57 S_Transcript_104238:2846-3133(-)
ATGGGCAATGATACTCAATGTAAAGTTGTCGGTCGAGGTACAATTAAAATCAAGACACATGATGGTGTTGTAAGGACATTGACAGGTGTCAGACATGTCCCCGATTTGAAACGGAATCTCATTTCTTTAGGCACCCTTGAATCTCATGGGTGTAAATACTCAGCTGAAGGTGGAGTTCTGAAAGTGTCCAAAGGAGCTCTTGTGTTACTAAAGGCAATTCGATCTGGTAGTCTCTATGTGCAAAGACGACACCAAGTTGTGGCATATGAGATTGGGCCACATGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104238.p5 GENE.S_Transcript_104238~~S_Transcript_104238.p5 ORF type:complete len:96 (-),score=15.57 S_Transcript_104238:2846-3133(-)
MGNDTQCKVVGRGTIKIKTHDGVVRTLTGVRHVPDLKRNLISLGTLESHGCKYSAEGGVLKVSKGALVLLKAIRSGSLYVQRRHQVVAYEIGPHE*

Click here to download the sequence:
Link to NCBI Protein BLAST