Transcript Information: S_Transcript_104446.p2


Annotated TAIR IDAT5G45500.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18432636-18434951 | Reverse length=771
E-Value5E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8829953704137
Replicate 21.3875968275166
Replicate 31.5368946736334
Condition 2: 8 Hour
Replicate 12.2130122027213
Replicate 22.2864310716702
Replicate 31.8768670847153
Condition 3: 24 Hour
Replicate 12.8508259901247
Replicate 22.7082542135258
Replicate 32.220808941331


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104446.p2 GENE.S_Transcript_104446~~S_Transcript_104446.p2 ORF type:complete len:636 (+),score=108.95,LRR_4|PF12799.3|2.1e+03,LRR_4|PF12799.3|2.4e+03,LRR_4|PF12799.3|6.6e+02,LRR_4|PF12799.3|6e-05,LRR_4|PF12799.3|33,LRR_4|PF12799.3|45,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|9.7e+02,LRR_8|PF13855.2|31,LRR_8|PF13855.2|9.8e+02,LRR_8|PF13855.2|0.0082,LRR_8|PF13855.2|0.022,LRR_8|PF13855.2|2e+03,LRR_8|PF13855.2|3e+03,LRR_8|PF13855.2|9.9e+02,LRR_8|PF13855.2|1.2e+03 S_Transcript_104446:4901-6808(+)
ATGTCTATCTTCTCATCGCATTCAAAATCACCCGTAAATCTCTCGGCATTTGCTCAAAATGACAAGTTCCTGACAATAAGCGACATCAGTGATTTAGTGTTGCCTAGTTTGCTCAATATACCGGAAGATGTTCAAAGAGACAGTAGATGTAGCCAAGTGATTTTGGGGCGGTTAGAAAAATTCAGGACAGATTTACAGTATATTAAGGACTACTATGAAACACTTCAGTTTTTGGATGATGCTGGCAGCCATTTTAAAAGGCTCTTGCAACATATTTGTGATGCTCCATTTGTAGCTGCTTTCACTGATGATTCTAGATACAGGCAGCTAGAGGAGATTGTGAATAGATTCAAGATCTGCATATATTCAAATACATTTTATAGACCATCTCCTGATTTTGGGGGCTCCAAGCTATTGGAAGAGCTCAACAATGTGCCTCGAAAATTGGCAATCGACCCTCCTGCCATGATTCCAGATTTTGAGAGCCCTTCTGCCTTTAGGTACTTCGGTGAAAGTTATGAATTGCTTGATCATTTACATAAGACATGTTTACTGTGTTTCTCGGCATTCCCAGATGGTGCAGAGATAAAAAAGAGGACAATAATCTATTGGTGGATTGGGGAGGAGCTGATTAAGCCTTGTGCACATGCTGATGGGGAGGAGACTGGGCACAGAATCCTTGCAACCTTAACCGAGCATGGCTTTGTTGAGGATGTTATCAGGAAAGATAGGGTGACAAGTAGCTGTAGGGTCCGTCCTTTTGTTCGAACAGTCTTAATTTATCTTGCAAGGGCAGTGAGCTTCTTTGATTATGTCGAAGAAAGGAAATACGCTGTTGACAATCTGAGCCATGGAAGCAAGTGCAGGGTGTGTTTTGTAAAACCCCACAATGGTGATTCCACCCCGTCCTCCTTGCAGCACCTGAGAAGGAGTGCTGACACATATCTGGAGTGTATTGAAACACTGTTTAATGTGAACAAGTGCTACCTGGACATAAAGCTGCACTGGTTCTGGAAGATGAAGAATATCAAAGCCCTCTATCTGGGGAGATGCGACTCTAAGGCCATCCAGCACATTGAAGTCAAGAGCTGTAAGTTCCTTTCAGGGCTGAAATATATGAGGAAGCTGAGGCTTCTGAGCATTCAGGGGGTTTCAAAAATCGTGAAGCTTCCCGAATCAATTGGAATGGCCAAGAACCTAAGGATTTTGGATCTCAGAGATTGCAGTGACATAGAGGAACTCCCTGAGGCTGTGAAATCGCTTCAGAAGCTGACACACCTGGACTTGTCTGGGTGTTATTCTCTTGCACGCCTGCCTAAAGGGGTTTCTTCCCTGTTAGAGCTTCAGGTCCTAAAGGGTTTTCTTATCCGAGAAGATCACCCCAAGAGGAAAGATTTATGTTCTTTCCATGACCTCATGAAGCTGAAGAAGCTGAGAAAATTAAGCATCACTACAAGCATTAGGGGCTTTCCTGCAGATGAAGACCTCAAGGTTTTCATAGAGATGAAGGAGCTTCGGAAGCTGACGATTTCTTGGCGAGGGCCTTATCGCAATTATCTACAAACGGGGCCCAAAATTGACATGAAAGCTTCGATGGAGCGGTTAGAGAAACTGGACCTTCAACACATCCCTTATGGAGCAGCACCAAAATGGCTTGTATCTGATGAACTGCAGAAACTTAAGAAGCTTTACATTAAAGGCAGCAAGTTCCTAGAAGACTTGGGTGAGGAGCGACCTCTGTCTTGGAGGGTAGAAATGTTACGTTTGAAGCACTTGCCGCAGCTGGCAATGGAATGGTCAAAATTGCATGGCTTATTTCCAAACCTGACTTATTTGGAACATGTCAAGTGCCCAAAGCTGACTTCAGTTCCATGCAGCGATGAGGGAGTGTGGCTAAATCCCCCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104446.p2 GENE.S_Transcript_104446~~S_Transcript_104446.p2 ORF type:complete len:636 (+),score=108.95,LRR_4|PF12799.3|2.1e+03,LRR_4|PF12799.3|2.4e+03,LRR_4|PF12799.3|6.6e+02,LRR_4|PF12799.3|6e-05,LRR_4|PF12799.3|33,LRR_4|PF12799.3|45,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|9.7e+02,LRR_8|PF13855.2|31,LRR_8|PF13855.2|9.8e+02,LRR_8|PF13855.2|0.0082,LRR_8|PF13855.2|0.022,LRR_8|PF13855.2|2e+03,LRR_8|PF13855.2|3e+03,LRR_8|PF13855.2|9.9e+02,LRR_8|PF13855.2|1.2e+03 S_Transcript_104446:4901-6808(+)
MSIFSSHSKSPVNLSAFAQNDKFLTISDISDLVLPSLLNIPEDVQRDSRCSQVILGRLEKFRTDLQYIKDYYETLQFLDDAGSHFKRLLQHICDAPFVAAFTDDSRYRQLEEIVNRFKICIYSNTFYRPSPDFGGSKLLEELNNVPRKLAIDPPAMIPDFESPSAFRYFGESYELLDHLHKTCLLCFSAFPDGAEIKKRTIIYWWIGEELIKPCAHADGEETGHRILATLTEHGFVEDVIRKDRVTSSCRVRPFVRTVLIYLARAVSFFDYVEERKYAVDNLSHGSKCRVCFVKPHNGDSTPSSLQHLRRSADTYLECIETLFNVNKCYLDIKLHWFWKMKNIKALYLGRCDSKAIQHIEVKSCKFLSGLKYMRKLRLLSIQGVSKIVKLPESIGMAKNLRILDLRDCSDIEELPEAVKSLQKLTHLDLSGCYSLARLPKGVSSLLELQVLKGFLIREDHPKRKDLCSFHDLMKLKKLRKLSITTSIRGFPADEDLKVFIEMKELRKLTISWRGPYRNYLQTGPKIDMKASMERLEKLDLQHIPYGAAPKWLVSDELQKLKKLYIKGSKFLEDLGEERPLSWRVEMLRLKHLPQLAMEWSKLHGLFPNLTYLEHVKCPKLTSVPCSDEGVWLNPP*

Click here to download the sequence:
Link to NCBI Protein BLAST