Transcript Information: S_Transcript_104549.p1


Annotated TAIR IDAT4G19191.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10496228-10498192 | Forward length=654
E-Value2.1E-245
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1197824322957
Replicate 26.1081550514754
Replicate 35.8871668890162
Condition 2: 8 Hour
Replicate 19.5819076008903
Replicate 28.5290557597747
Replicate 38.706927160885
Condition 3: 24 Hour
Replicate 16.0147788128414
Replicate 25.3145095224415
Replicate 35.647295872855


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104549.p1 GENE.S_Transcript_104549~~S_Transcript_104549.p1 ORF type:complete len:661 (+),score=105.68,PPR_2|PF13041.2|4.4e-07,PPR_2|PF13041.2|0.051,PPR_2|PF13041.2|9.8e-06,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|5.1e-08,PPR_2|PF13041.2|0.91,PPR_2|PF13041.2|1.5e-12,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|8.6e-10,PPR_2|PF13041.2|77,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|25,PPR|PF01535.16|0.0088,PPR|PF01535.16|0.14,PPR|PF01535.16|0.0022,PPR|PF01535.16|0.00044,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.39,PPR|PF01535.16|5.3e-09,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|3.2e-05,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.098,PPR|PF01535.16|0.0065,PPR|PF01535.16|7e+03,PPR|PF01535.16|5.4,PPR_3|PF13812.2|0.0081,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|15,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|0.25,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|42,PPR_1|PF12854.3|0.073,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.00043,PPR_1|PF12854.3|72,PPR_1|PF12854.3|0.00048,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|0.089 S_Transcript_104549:833-2815(+)
ATGACCCTATTAGTCAACCAAATTTCGAAAATTCCGATCATTGCTCATTGGAATAGTTGCATAAGAGAAGCTATCAACAATGGTTATGTCCACAAAGCGCTTCTTTTGTATCGCCAAATGAAAGAAGCTGGGGTAGTCCCCAACAAATTGACCTTCCCCTTTGTAGCAAAAGCTTGTGCCAAGAATTCGGATCTAATACAGTCCCAAATACTTCATGCTCAAATCTTGAAATCACCCTTTTGTTGGGATGCCTTTGTTGGAACTGCAGTTGTCGACATGTATGTTAAATGCCACCATCTGGGTGGTGCATACAAGGTGTTCGAAGAAATGCCTGAGAGAGATGTGACTTGTTGGAATGCCATGCTTCTGGGTTTCGCTAAGTCTGGTTTAGTGGATAGATTTTCCGTTCTTTTCCGGGAAATGAGGGTACAGGGTGCTGTTCCGGACTCTGTTACAATGAAAGGGTCAATTCAATCTGTTACTGAATTGAAAGAACTTTGGTTGGTTGAGGGTGTTCATGCGCTTGGAATTCATGTTGGGATGATTGGTGATGTTTCTTTGGCTAATACTTTGATTTCTGCTTATGGGAAATGTGGGGACTTAGATTCAGCAAAGAGTATTTTCAAAGGCATTGATGTTGAATCAAGGACAGTTGTATCTTGGAATTCTTTAATTTCTGGCCATGCCCTGTTTGAGAATTATCATAGTGCCTTCAGTCTATTCCAGTGCATGGGTTATGAAGGGTTTAGGCCTGACATAAGCACATTTCTTAGCCTTTTGTGTTCTTGTGTGAAGCCTGAGGCTTTACCTTGGGGTAAGCTACTTCATTCGCATATAATTCAACTTGGGTTTGGTATAGAAGTTACATTGGCTAATACATTGCTGACTATGTATTCAAAGTGTTGCGATATTGATTCAGCTTTGCTGTTATTTCAGCATATGCCATTCAAGACCTGTGTCTCATGGACAGCCATGATTGGTGGCTATGTCGAGAAAGGAAATTTAGATGAAGCTTTGTCCTTGTTTTTGGAAATGCAAGAGGCAGGGCAGAAACCTGATGTTGTCACTCTTGTTTACCTATTGTCAGGCTGTGGCCAATCAGGTCAATTGCAACTTGGCAGATGGCTTGATAACTATGCAATTTCGAATGGACTAAGAGATAGTGTCATTGTGTGCAATGCAATAATAGACATGTATGCAAAATGTGGGTTGATAAATGAGGCTAAAGAAATATTTCATTCAATGCCTTCCAAAACGATTGTCTCTTGGACAACAATGATAGCTGGGCTTGCTCTCAATGGAGAATTTGGACAGGCTCTGGACCTGTTTTTCAAAATGGTCAAGTTAGGATTGAAGCCAAACCATATAACATTTCTGTCAATACTTCAAGCATGCACACACGCGGGCTTCCTGGATAAGGGATGGGAGTGCTTTGATTTGATGACCAAAGTGTACAAATTAAATCCTTGGCTGGAACATTACTCTTGTATGGTTGATCTTCTTGGCCGTAAAGGAAAATTGCACGCGGCATTAGAGCTCATTCAAAAAATGCCTTTAACACCTGATGCCAGCTTATGGGGTGCATTGCTTGCTGCTTGTAAGAAGCACTGTAACTTACAAATTGGCGAGTATGCAGCTCAATGCCTTGATGAACTGGAGACCCAAGCTGCCGTTTCATATGTTGAAATGGCAAATATGTATGCTGCTGCAGGAAGATGGGACGGGGTATCAAAAGTTCGAGCGCAGATGAAGAAGAACGAGGTGAAAAAATCCCCTGGTCAAAGTCTTATTCAACTTGATGGTAGGAATCACATATTTAGTGTGGAAGAAAGATGTCATCCACAAGGCTCTCAAATATATCAAGTTCTAAACGTATTGGCCTTACAGTTGAAAGAAGATAGATCTTTATGCCTCTTTGAAGGATTTCTAGAGCATGAGATGGGAGCTGTAACAGTTTCTGGTGGCTTAACTCCTCCTTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104549.p1 GENE.S_Transcript_104549~~S_Transcript_104549.p1 ORF type:complete len:661 (+),score=105.68,PPR_2|PF13041.2|4.4e-07,PPR_2|PF13041.2|0.051,PPR_2|PF13041.2|9.8e-06,PPR_2|PF13041.2|0.11,PPR_2|PF13041.2|5.1e-08,PPR_2|PF13041.2|0.91,PPR_2|PF13041.2|1.5e-12,PPR_2|PF13041.2|0.00016,PPR_2|PF13041.2|8.6e-10,PPR_2|PF13041.2|77,PPR_2|PF13041.2|1.5,PPR_2|PF13041.2|25,PPR|PF01535.16|0.0088,PPR|PF01535.16|0.14,PPR|PF01535.16|0.0022,PPR|PF01535.16|0.00044,PPR|PF01535.16|0.00027,PPR|PF01535.16|0.39,PPR|PF01535.16|5.3e-09,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|3.2e-05,PPR|PF01535.16|2.6e-06,PPR|PF01535.16|0.098,PPR|PF01535.16|0.0065,PPR|PF01535.16|7e+03,PPR|PF01535.16|5.4,PPR_3|PF13812.2|0.0081,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|4,PPR_3|PF13812.2|0.0011,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.058,PPR_3|PF13812.2|0.0023,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|1.3,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|15,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|0.25,PPR_1|PF12854.3|1e+02,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|42,PPR_1|PF12854.3|0.073,PPR_1|PF12854.3|0.025,PPR_1|PF12854.3|0.039,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|1.9e+02,PPR_1|PF12854.3|0.00043,PPR_1|PF12854.3|72,PPR_1|PF12854.3|0.00048,PPR_1|PF12854.3|0.016,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|0.089 S_Transcript_104549:833-2815(+)
MTLLVNQISKIPIIAHWNSCIREAINNGYVHKALLLYRQMKEAGVVPNKLTFPFVAKACAKNSDLIQSQILHAQILKSPFCWDAFVGTAVVDMYVKCHHLGGAYKVFEEMPERDVTCWNAMLLGFAKSGLVDRFSVLFREMRVQGAVPDSVTMKGSIQSVTELKELWLVEGVHALGIHVGMIGDVSLANTLISAYGKCGDLDSAKSIFKGIDVESRTVVSWNSLISGHALFENYHSAFSLFQCMGYEGFRPDISTFLSLLCSCVKPEALPWGKLLHSHIIQLGFGIEVTLANTLLTMYSKCCDIDSALLLFQHMPFKTCVSWTAMIGGYVEKGNLDEALSLFLEMQEAGQKPDVVTLVYLLSGCGQSGQLQLGRWLDNYAISNGLRDSVIVCNAIIDMYAKCGLINEAKEIFHSMPSKTIVSWTTMIAGLALNGEFGQALDLFFKMVKLGLKPNHITFLSILQACTHAGFLDKGWECFDLMTKVYKLNPWLEHYSCMVDLLGRKGKLHAALELIQKMPLTPDASLWGALLAACKKHCNLQIGEYAAQCLDELETQAAVSYVEMANMYAAAGRWDGVSKVRAQMKKNEVKKSPGQSLIQLDGRNHIFSVEERCHPQGSQIYQVLNVLALQLKEDRSLCLFEGFLEHEMGAVTVSGGLTPPC*

Click here to download the sequence:
Link to NCBI Protein BLAST