Transcript Information: S_Transcript_104683.p1


Annotated TAIR IDAT1G09270.1
Annotated Gene Nameimportin alpha isoform 4
Annotated Gene Symbol(s)IMPA-4
Annotation TypeOrtholog
Chromosome Positionchr1:2994506-2997833 | Forward length=538
E-Value9.2e-322
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.409843664741
Replicate 248.406418879921
Replicate 343.388601122053
Condition 2: 8 Hour
Replicate 143.406717977597
Replicate 241.237661298601
Replicate 342.353316603181
Condition 3: 24 Hour
Replicate 143.200702425429
Replicate 242.02953116957
Replicate 339.668252674464


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104683.p1 GENE.S_Transcript_104683~~S_Transcript_104683.p1 ORF type:3prime_partial len:536 (+),score=150.84,Arm|PF00514.19|1.2e-09,Arm|PF00514.19|3.7e-12,Arm|PF00514.19|1.3e-07,Arm|PF00514.19|0.0025,Arm|PF00514.19|4.3e-09,Arm|PF00514.19|1.1e-10,Arm|PF00514.19|6.2e-12,Arm|PF00514.19|7.9e-07,HEAT_EZ|PF13513.2|4.4e+03,HEAT_EZ|PF13513.2|2.3e-10,HEAT_EZ|PF13513.2|0.024,HEAT_EZ|PF13513.2|1.2e+02,HEAT_EZ|PF13513.2|0.0066,HEAT_EZ|PF13513.2|5.8,IBB|PF01749.16|4.7e-22,HEAT_2|PF13646.2|0.0001,HEAT_2|PF13646.2|2e-06,HEAT_2|PF13646.2|0.046,HEAT_2|PF13646.2|0.00022,HEAT_2|PF13646.2|0.00041,HEAT_2|PF13646.2|3.4e+02,Arm_3|PF16186.1|2.9e+03,Arm_3|PF16186.1|9.6e-22,HEAT|PF02985.18|5.9e+02,HEAT|PF02985.18|0.0048,HEAT|PF02985.18|2.5e+03,HEAT|PF02985.18|5.7e+03,HEAT|PF02985.18|5.5,HEAT|PF02985.18|5.7,HEAT|PF02985.18|1.1e+02,HEAT|PF02985.18|1.5e+03,Arm_2|PF04826.9|41,Arm_2|PF04826.9|0.075,Arm_2|PF04826.9|1.4,CTNNBL|PF08216.7|4.8e+02,CTNNBL|PF08216.7|3.7,CTNNBL|PF08216.7|7.7,CTNNBL|PF08216.7|7.7 S_Transcript_104683:200-1804(+)
ATGTCGCTAAGGCCGAATGTAAGGTCTGAGGTCCGTAAGAAGGCCTACAAAATTGGGGTTGATGCCGATGAAGCTCGCCGTAGAAGAGAGGATAATTTGGTGGAGATCAGGAAGAATAAGAGGGAAGATAATTTGTTGAAGAAACGTCGTGAGGGTATGCTTCTTCAATCTCAATCTCAACCCCTTGTCAACGATGCTTCCCAGAATACCGACAAGAAGTTGGAAAGTATTCCTCTAATGGTCCAAGGAGTGGCATCTGCTGACCCTGCTGCTCAATTGGAGGCAACCACTCAGTTCAGAAAACTTCTGTCCATTGAACGCTGTCCTCCAATTGATGAGGTTATCAAAGCTGGTGTTGTTCCAAGATTTGTTGAGTTCCTTGACAGGCATGATTTACCTCAACTTCAGTTTGAGGCAGCATGGGCTTTGACCAATGTGGCATCTGGAACTTCAGAGCATACACGAGTGGTAATTGAGCATGGTGCTGTTCCAAAGTTTGTGCAACTCCTTGCATCTGCCAGTGATGATGTTCGCGAGCAGGCAGTGTGGGCTTTGGGCAATGTTGCTGGTGACTCTCCAAGCTGTAGGGATCTTGTGTTGGGTCATGGTGCTCTGGTTCCATTGCTGTCACAATTGAATGAAAACTCAAAATTATCGATGCTAAGGAATGCTACTTGGACATTGTCCAATTTTTGTCGTGGCAAGCCGGCAGCGCCATTTGAACAGGTGAAACCAGCTTTACCTGTGCTTCAACGGCTTATCTTTCTAAATGATGAAGAAGTGTTAACAGATGCTTGTTGGGCACTTTCTTATCTGTCAGATGGCCCTAATGACAAAATCCAGGCTGTTATTGAAGCTGGAGTGTGCCCACGGCTCATTCAGCTCCTTCTGCATCCATCACCGACAGTTCTCATACCTGCTCTTCGAACAGTGGGTAATATTGTCACTGGAGATGATAGCCAGACTCAGTATGTATTGGACAATAATGTCCTTCCCTGTCTTCTTCAACTTCTCACTCAAAATCACAAGAAGAGCATTAAGAAGGAAGCATGCTGGACAATATCAAATATAACTGCTGGGAATAGGGCCCAAATTCAGGCTGTTATTGAGGCTGGTATAGTGCTTCCACTTGTGCAACTGCTCCAGCATGCAGAGTTCGACATCAAGAAGGAGGCTGCATGGGCTATCTCAAATGCCACATCTGGGGGATCTCATGAGCAGATTCGATTTTTGGTTAGTCAAGGTTGCATCAAGCCACTGTGTGATCTTCTAATTTGCCCAGATCCGCGAATTGTGACAGTGTGCCTTGAGGGGCTCGAGAACATCCTTAAGGTGGGAGAGGCTGACAAAGATATGGGGATGAATGGCGGAGTGAATATATATGCTCAAATGATTGATGAATGTGAGGGATTGGATAAGATTGAGAACTTGCAGTCACATGACAATAATGATATCTACGAGAAGGCTGTGAAAGTCTTGGAGAAATACTGGGCTGAGGAAGAAGAGGAGGATCACAATCTTCAAGATGGTGGTAATGTGAATCCGCAAGGATTCAACTTTGGTTCTGCTCAACCCAATGTCCCAGCTGGTGGTTTCAAATTTGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104683.p1 GENE.S_Transcript_104683~~S_Transcript_104683.p1 ORF type:3prime_partial len:536 (+),score=150.84,Arm|PF00514.19|1.2e-09,Arm|PF00514.19|3.7e-12,Arm|PF00514.19|1.3e-07,Arm|PF00514.19|0.0025,Arm|PF00514.19|4.3e-09,Arm|PF00514.19|1.1e-10,Arm|PF00514.19|6.2e-12,Arm|PF00514.19|7.9e-07,HEAT_EZ|PF13513.2|4.4e+03,HEAT_EZ|PF13513.2|2.3e-10,HEAT_EZ|PF13513.2|0.024,HEAT_EZ|PF13513.2|1.2e+02,HEAT_EZ|PF13513.2|0.0066,HEAT_EZ|PF13513.2|5.8,IBB|PF01749.16|4.7e-22,HEAT_2|PF13646.2|0.0001,HEAT_2|PF13646.2|2e-06,HEAT_2|PF13646.2|0.046,HEAT_2|PF13646.2|0.00022,HEAT_2|PF13646.2|0.00041,HEAT_2|PF13646.2|3.4e+02,Arm_3|PF16186.1|2.9e+03,Arm_3|PF16186.1|9.6e-22,HEAT|PF02985.18|5.9e+02,HEAT|PF02985.18|0.0048,HEAT|PF02985.18|2.5e+03,HEAT|PF02985.18|5.7e+03,HEAT|PF02985.18|5.5,HEAT|PF02985.18|5.7,HEAT|PF02985.18|1.1e+02,HEAT|PF02985.18|1.5e+03,Arm_2|PF04826.9|41,Arm_2|PF04826.9|0.075,Arm_2|PF04826.9|1.4,CTNNBL|PF08216.7|4.8e+02,CTNNBL|PF08216.7|3.7,CTNNBL|PF08216.7|7.7,CTNNBL|PF08216.7|7.7 S_Transcript_104683:200-1804(+)
MSLRPNVRSEVRKKAYKIGVDADEARRRREDNLVEIRKNKREDNLLKKRREGMLLQSQSQPLVNDASQNTDKKLESIPLMVQGVASADPAAQLEATTQFRKLLSIERCPPIDEVIKAGVVPRFVEFLDRHDLPQLQFEAAWALTNVASGTSEHTRVVIEHGAVPKFVQLLASASDDVREQAVWALGNVAGDSPSCRDLVLGHGALVPLLSQLNENSKLSMLRNATWTLSNFCRGKPAAPFEQVKPALPVLQRLIFLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLIQLLLHPSPTVLIPALRTVGNIVTGDDSQTQYVLDNNVLPCLLQLLTQNHKKSIKKEACWTISNITAGNRAQIQAVIEAGIVLPLVQLLQHAEFDIKKEAAWAISNATSGGSHEQIRFLVSQGCIKPLCDLLICPDPRIVTVCLEGLENILKVGEADKDMGMNGGVNIYAQMIDECEGLDKIENLQSHDNNDIYEKAVKVLEKYWAEEEEEDHNLQDGGNVNPQGFNFGSAQPNVPAGGFKFG

Click here to download the sequence:
Link to NCBI Protein BLAST