Transcript Information: S_Transcript_104690.p1


Annotated TAIR IDAT4G16143.1
Annotated Gene Nameimportin alpha isoform 2
Annotated Gene Symbol(s)IMPA-2
Annotation TypeOrtholog
Chromosome Positionchr4:9134450-9137134 | Reverse length=535
E-Value2.6e-315
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.56063143487
Replicate 266.88552001544
Replicate 359.853191825217
Condition 2: 8 Hour
Replicate 170.120103105963
Replicate 264.204710594308
Replicate 361.768413412948
Condition 3: 24 Hour
Replicate 164.113514928714
Replicate 260.7036291478
Replicate 360.945460458459


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104690.p1 GENE.S_Transcript_104690~~S_Transcript_104690.p1 ORF type:complete len:538 (+),score=140.91,Arm|PF00514.19|3.3e-11,Arm|PF00514.19|1.7e-14,Arm|PF00514.19|1.6e-05,Arm|PF00514.19|1.5e-06,Arm|PF00514.19|7e-08,Arm|PF00514.19|2.9e-10,Arm|PF00514.19|2.2e-12,Arm|PF00514.19|2.1e-06,HEAT_EZ|PF13513.2|4.2e+02,HEAT_EZ|PF13513.2|4e-10,HEAT_EZ|PF13513.2|9.5e+03,HEAT_EZ|PF13513.2|0.019,HEAT_EZ|PF13513.2|7.1e-05,HEAT_EZ|PF13513.2|8.4,HEAT_2|PF13646.2|0.47,HEAT_2|PF13646.2|4.5e-09,HEAT_2|PF13646.2|0.19,HEAT_2|PF13646.2|0.0083,HEAT_2|PF13646.2|0.14,HEAT_2|PF13646.2|7e+02,Arm_3|PF16186.1|1.8e-20,IBB|PF01749.16|8.9e-19,HEAT|PF02985.18|2.7,HEAT|PF02985.18|6.9e-06,HEAT|PF02985.18|5.4e+03,HEAT|PF02985.18|52,HEAT|PF02985.18|2.3e+03,HEAT|PF02985.18|0.57,HEAT|PF02985.18|4.3e+02,HEAT|PF02985.18|1.6e+03,Arm_2|PF04826.9|0.068,Arm_2|PF04826.9|4e+03,Arm_2|PF04826.9|0.0016,Arm_2|PF04826.9|3e+02,Atx10homo_assoc|PF09759.5|55,Atx10homo_assoc|PF09759.5|0.43,Atx10homo_assoc|PF09759.5|0.18 S_Transcript_104690:160-1773(+)
ATGTCGTTGAGGCCAAACGCGAGAACGGAGGTGAGGAGGAGCAAGTACAAGGTTGCAGTAGATGCCGATGAAGGGAGAAGAAGGAGAGAAGATAATTTGGTGGAGATTCGTAAGAATCGTCGTGAAGAAGGCCTCCAAAAGAAACGTCGTGAAGGCCTTCAGTCTGCTGCTTTTTCTCAGCAATCCGCTTCTCAGTCTACTCCTTCTGGCTCCAGTGGTGCTTTCGAGAAGAAGATTGATAGTTTGCCGCAGTTGGTTTCTGGTGTGTATATGGAAGACCGTGCTGCTCAACTCGAGGCCACTACTCACTTTCGGAAGTTGCTCTCTATAGAGCGCAATCCTCCCATAGAAGAGGTTGTTCAGTCCGGGGTTGTTCCTCGCCTTGTTGAATTTTTGGGTAGAGATGATTTCCCACAGCTTCAGTTTGAGGCTGCATGGGCCCTTACAAATATCGCTTCTGGTACATCAGAGAACACCAAAGTCGTCATTGATCATGGAGCTGTCCCTATTTTCGTAAAGCTCCTTTCTTCACCCAGTGATGATGTTCGTGAGCAGGCTGTTTGGGCATTGGGAAACATTGCTGGTGACTCACCTAAATGCCGTGACCTAGTCCTTGCACAAGGTGCTCTAATGCCATTGCTGGCCCAATTCAATGAGCAAGCAAAACTGTCTATGCTGAGAAATGCCACGTGGACTTTGTCGAACTTCTGCAGAGGCAAGCCACAGCCCTCTTTTGACCAGACGAGGCCTGCTCTTCCAACTCTGGAACGTCTTATCCACTCAAATGACGAAGAAATTCTCACAGATGCTTGTTGGGCGTTGTCATATCTTTCTGATGGTACCAATGACAAGATCCAGGCTGTCATTGAAGCTGGCGTCTGCCCTCGACTTGTGGAGCTTTTGCTCCATTATTCTCCATCTGTCCTCATTCCTGCTCTCCGTACTGTTGGAAATATTGTCACCGGTGATGACATGCAGACTCAGTGTATTATAGAACATCAGGCGCTTCCTTGTCTTCTAAATTTGCTGACGCAAAATCACAAGAAGAGTATAAGAAAAGAAGCTTGCTGGACCATTTCGAACATCACCGCTGGGACTAAGGAGCAAATACAGGCTGTCATTGAGGCTGGTATTATTGGCCCTCTTGTCAATCTACTCCAAAACGCCGAGTTTGATATTAAGAAGGAAGCTGCTTGGGCTATATCAAATGCAACTTCAGGAGGTTCACATGACCAAATAAAGTTTTTGGTTAGCCAGGGATGCATAAAGCCACTGTGTGATCTTCTGGTTTGTCCTGATCCAAGGATTGTCACTGTCTGCTTGGAAGGTCTTGAAAATATATTGAAGGTTGGGGAAGCTGAAAAGAACCTGGGCACCACTGGAAGTGTCAACGCTTACGCACAGATGCTTGAAGAAGCTGATGGTTTGGAGAAGATAGAGAGTCTGCAGAGTCATGATAACAGTGAGATATATGAGAAGTCCGTAAAGATTTTGGAAACCTATTGGCTCGAAGAGGATGATGAGGCATTGCCTTCAGCTGATGCTCCTCAGAATGGGTTTCAGTTTGGAGGCAGTGAAGTGAACATCCCCCAAGGTGGCTTTAACTTTGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104690.p1 GENE.S_Transcript_104690~~S_Transcript_104690.p1 ORF type:complete len:538 (+),score=140.91,Arm|PF00514.19|3.3e-11,Arm|PF00514.19|1.7e-14,Arm|PF00514.19|1.6e-05,Arm|PF00514.19|1.5e-06,Arm|PF00514.19|7e-08,Arm|PF00514.19|2.9e-10,Arm|PF00514.19|2.2e-12,Arm|PF00514.19|2.1e-06,HEAT_EZ|PF13513.2|4.2e+02,HEAT_EZ|PF13513.2|4e-10,HEAT_EZ|PF13513.2|9.5e+03,HEAT_EZ|PF13513.2|0.019,HEAT_EZ|PF13513.2|7.1e-05,HEAT_EZ|PF13513.2|8.4,HEAT_2|PF13646.2|0.47,HEAT_2|PF13646.2|4.5e-09,HEAT_2|PF13646.2|0.19,HEAT_2|PF13646.2|0.0083,HEAT_2|PF13646.2|0.14,HEAT_2|PF13646.2|7e+02,Arm_3|PF16186.1|1.8e-20,IBB|PF01749.16|8.9e-19,HEAT|PF02985.18|2.7,HEAT|PF02985.18|6.9e-06,HEAT|PF02985.18|5.4e+03,HEAT|PF02985.18|52,HEAT|PF02985.18|2.3e+03,HEAT|PF02985.18|0.57,HEAT|PF02985.18|4.3e+02,HEAT|PF02985.18|1.6e+03,Arm_2|PF04826.9|0.068,Arm_2|PF04826.9|4e+03,Arm_2|PF04826.9|0.0016,Arm_2|PF04826.9|3e+02,Atx10homo_assoc|PF09759.5|55,Atx10homo_assoc|PF09759.5|0.43,Atx10homo_assoc|PF09759.5|0.18 S_Transcript_104690:160-1773(+)
MSLRPNARTEVRRSKYKVAVDADEGRRRREDNLVEIRKNRREEGLQKKRREGLQSAAFSQQSASQSTPSGSSGAFEKKIDSLPQLVSGVYMEDRAAQLEATTHFRKLLSIERNPPIEEVVQSGVVPRLVEFLGRDDFPQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLSSPSDDVREQAVWALGNIAGDSPKCRDLVLAQGALMPLLAQFNEQAKLSMLRNATWTLSNFCRGKPQPSFDQTRPALPTLERLIHSNDEEILTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHYSPSVLIPALRTVGNIVTGDDMQTQCIIEHQALPCLLNLLTQNHKKSIRKEACWTISNITAGTKEQIQAVIEAGIIGPLVNLLQNAEFDIKKEAAWAISNATSGGSHDQIKFLVSQGCIKPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGTTGSVNAYAQMLEEADGLEKIESLQSHDNSEIYEKSVKILETYWLEEDDEALPSADAPQNGFQFGGSEVNIPQGGFNFG*

Click here to download the sequence:
Link to NCBI Protein BLAST