Transcript Information: S_Transcript_104781.p1


Annotated TAIR IDAT5G54780.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22248696-22251692 | Reverse length=432
E-Value2.1E-241
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.186706020887
Replicate 225.344440178198
Replicate 326.039286415518
Condition 2: 8 Hour
Replicate 123.960564406664
Replicate 222.832596094549
Replicate 320.974403821835
Condition 3: 24 Hour
Replicate 125.594005371131
Replicate 225.982996795767
Replicate 330.705097536663


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_104781.p1 GENE.S_Transcript_104781~~S_Transcript_104781.p1 ORF type:complete len:437 (+),score=91.63,RabGAP-TBC|PF00566.14|4.6,RabGAP-TBC|PF00566.14|2.1e-37 S_Transcript_104781:630-1940(+)
ATGAATTTGTGGAGGGACCCTGGACAACCTACTGATTCTTATTATGAGGTCAGGCCTGAAATTACTGATGCTCCTAAGACCAAGTTCAGGATCAAGCAAGGTAAAACATTGAGTGTAAGGAAATGGCAGGCTGCCTTTTCACCAGAAGGCCAACTCGATATAGGCAAAACCTTAAGTAGGATCCATCGTGGGGGGATCCATCCATCAATTAGGGGAGAAGTCTGGGAATTCCTGCTTGGTTGTTATGATCCAAGGAGCACATTTGATGAGCGAGCTCAAATACGTAAGCGGAGAAGGGTGCAATATGCTCAGTGGAAAGAGGAGTGCCGTCAGATGTTTCCCCTTATTGGTAGTGGTAGATTTATAACAGCCCCTATAATCAACGAACAGGGAGAGCCTATTCAAGATCCATTGGTGCTCTTAGAAACACAAATGGGAGATGCTGAAGCTGCTGCCATGGCAGCAAATGCAGCAAAGGATAGTGGTCCAATGAGCAAGAAAGAAATTCAGTGGAAGCTTGCTTTGCATCAAATAGGTCTTGACGTGAAACGCACTGACAGGGCACTTGTCTTCTATGAGAAGCAAGAAAATCTTGCTAAACTTTGGGACATTTTGTCTGTGTATGCATGGATAGATGAGGATGTCGGATACTGCCAAGGAATGAGTGATCTTTGTTCTCCCATGATAATTCTCCTTGACAATGAAGCCGATGCCTTTTGGTGCTTTGAACGCTTGATGCGCAGATTGCGAGGAAATTTCAGATCTACTACTGGGAGATCTGTTGGAGTGGAGGCACAACTAAGTAATTTGGCAGCAATTATTCAAGTTGTTGATCCCAAACTTCATCAACATTTAGAGACGCTTGGTGGAGGTGACTATCTATTTGCCATCCGAATGCTAATGGTTTTGTTTCGCCGAGAATTTTCTTTTGGTGATTCTCTATACCTTTGGGAGATGATGTGGGCTCTAGAGTATGATCCTGACCTCTTTGCCCTGTATGAAGAACCTGAATCATCCAGTGACAATGCTGAGGGATCTAAAGGACGAACAAAGTCAATACGCCATTATGGGAAGTATGAAAGGGAAAATTTGAAAAGTGGATCAAAGGAAGACGAACCTCTCCCCATTTCGGTCTTTCTTGTTGTCAGTGTCTTGAAAGAAAAGAGCCCCAAACTACTTAAAGAAGCTCGAGGTCTCGATGATGTTGTAAAGATTTTGAATGACGTAGCTGGAGACATAGACGCCAAGAAAGCTTGCGCCAACGCTATGAAGCTTCATAAAAAGTATTTAAAACAGGCAAAGAAGCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_104781.p1 GENE.S_Transcript_104781~~S_Transcript_104781.p1 ORF type:complete len:437 (+),score=91.63,RabGAP-TBC|PF00566.14|4.6,RabGAP-TBC|PF00566.14|2.1e-37 S_Transcript_104781:630-1940(+)
MNLWRDPGQPTDSYYEVRPEITDAPKTKFRIKQGKTLSVRKWQAAFSPEGQLDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYDPRSTFDERAQIRKRRRVQYAQWKEECRQMFPLIGSGRFITAPIINEQGEPIQDPLVLLETQMGDAEAAAMAANAAKDSGPMSKKEIQWKLALHQIGLDVKRTDRALVFYEKQENLAKLWDILSVYAWIDEDVGYCQGMSDLCSPMIILLDNEADAFWCFERLMRRLRGNFRSTTGRSVGVEAQLSNLAAIIQVVDPKLHQHLETLGGGDYLFAIRMLMVLFRREFSFGDSLYLWEMMWALEYDPDLFALYEEPESSSDNAEGSKGRTKSIRHYGKYERENLKSGSKEDEPLPISVFLVVSVLKEKSPKLLKEARGLDDVVKILNDVAGDIDAKKACANAMKLHKKYLKQAKKP*

Click here to download the sequence:
Link to NCBI Protein BLAST