Transcript Information: S_Transcript_105087.p1


Annotated TAIR IDAT5G47790.1
Annotated Gene NameSMAD/FHA domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19351396-19352579 | Forward length=369
E-Value9.8E-134
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.741029956697
Replicate 210.81509292035
Replicate 312.837590803291
Condition 2: 8 Hour
Replicate 113.485173288775
Replicate 215.572561308045
Replicate 313.426894202157
Condition 3: 24 Hour
Replicate 112.635765940638
Replicate 29.4988033812632
Replicate 311.869197367114


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105087.p1 GENE.S_Transcript_105087~~S_Transcript_105087.p1 ORF type:5prime_partial len:408 (+),score=91.94,FHA|PF00498.22|2e-17 S_Transcript_105087:3-1226(+)
TCAGCTGCTGCTACTGCTAAACAACCACCGGTGTCCCAGTCCCAAATTCATAGTTATCGTCACCAACACCAACACCAACACCAACAACATTCGGTGGTGGATGTTCGGTCGTCAACAACAACTACAACATCATCATCATCATCAGCCACTCAACTTGGTGGTTCCCAATCTAATTGGCAGCCTCCTGATTGGGCAATTGAACCTCGTCCTGGCGTCTATTATCTTGAGGTTTTAAAAGACGGAGATATTCTTGATCGGATTCCTCTTCATAAGCGCAGGCACATCTTCGGTAGGCAGTTTCATACTTGTGATTTTGTTCTTGATCATCAGTCTGTTTCCCGTCAACATGCTGCTGTCGTTCCCCACAAAAATGGAAGCATATATGTGATCGATTTGGGATCTGCCCATGGTACCTTTGTTGCCAATGAGAGATTAGCAAAAGATATTCCAGTAGAACTGGAAGTAGGCCAATCTTTGCGCTTTGCTGCTTCTACTAGAACTTATATCTTGAGGAAGAATGAAGATGCTCTTTTCCCACCTACTCCTGCCCCCACCGACATCGATTTGCTTTCACCCCCTGATCCTTCTGATGTCGATGCTCTTGTTGCTTATAACACTTTATTAAATCTCTATGGTATTACCACCAAATCACACCTCTCTCTTCTTACTAGTTCCACTACCCCAAATACTACTGATACCTCTCAACCTGAAAGGCTTCCTCCTAATAAGAGACTTAGGAAAACAAGAGTTGTTTTCAGAGACCAAGTTGGCGGTGACCTCGTTCAAGTTGTTGGAGTCTCTGATGGTGCCGATGTCGAAACTGAACCTGGTCCTCTTGGTCTCAAAGAGGGAAGTCTTGTCGGGAAGTATGAATCACTTGTGCAAATCACTGTCATACCCAAAGGGAAGGAACTCGAACACCCATCTCTCAAGGAAGAGAATCTCCCCCAAGCAGGTGTTACTGACAAACTACAACAGGTTTTGAACAAGGTTAAAAACACCCCCAGTTCTAAGATAGGCATCTACGATGATTTGTATGGCGAAACTTTTTCTGGGAAAGTGGGCTCGTCATGGGCTCATCCTTCTGCTACTTCTGGTGGGAGGGAACCGTCGCCATCAAACTGCAGAGGCAGAGATGTTATTAGTCCACCAACTTCTACACGAGCCAACAATAAGAATCATGTTGATCATGACGATGACGATGACAATTTGTTTGGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105087.p1 GENE.S_Transcript_105087~~S_Transcript_105087.p1 ORF type:5prime_partial len:408 (+),score=91.94,FHA|PF00498.22|2e-17 S_Transcript_105087:3-1226(+)
SAAATAKQPPVSQSQIHSYRHQHQHQHQQHSVVDVRSSTTTTTSSSSSATQLGGSQSNWQPPDWAIEPRPGVYYLEVLKDGDILDRIPLHKRRHIFGRQFHTCDFVLDHQSVSRQHAAVVPHKNGSIYVIDLGSAHGTFVANERLAKDIPVELEVGQSLRFAASTRTYILRKNEDALFPPTPAPTDIDLLSPPDPSDVDALVAYNTLLNLYGITTKSHLSLLTSSTTPNTTDTSQPERLPPNKRLRKTRVVFRDQVGGDLVQVVGVSDGADVETEPGPLGLKEGSLVGKYESLVQITVIPKGKELEHPSLKEENLPQAGVTDKLQQVLNKVKNTPSSKIGIYDDLYGETFSGKVGSSWAHPSATSGGREPSPSNCRGRDVISPPTSTRANNKNHVDHDDDDDNLFGD*

Click here to download the sequence:
Link to NCBI Protein BLAST