Transcript Information: S_Transcript_105196.p1


Annotated TAIR IDAT4G36480.1
Annotated Gene Namelong-chain base1
Annotated Gene Symbol(s)ATLCB1, LCB1, EMB2779, FBR11
Annotation TypeOrtholog
Chromosome Positionchr4:17218598-17221124 | Forward length=482
E-Value1.5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4268840656318
Replicate 26.9266897448012
Replicate 36.2190621677258
Condition 2: 8 Hour
Replicate 16.0752565438344
Replicate 27.5439954715357
Replicate 37.3118314458948
Condition 3: 24 Hour
Replicate 16.9852825115272
Replicate 26.4565509723315
Replicate 38.065188617915


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105196.p1 GENE.S_Transcript_105196~~S_Transcript_105196.p1 ORF type:5prime_partial len:172 (-),score=38.55,Aminotran_1_2|PF00155.17|3.1e-13 S_Transcript_105196:442-957(-)
GTAATGGGGCATGCGTTAGCTGCTGAGGGAGGATTTTGCACTGGAAGTGCACGAGTAGTTGATCATCAGCGCCTTAGCAGCTCCGGTTATGTATTCTCTGCTTCTTTGCCACCATACCTTGCAACTGCTGCAATATCTGCTATAGATGTCCTTGATGAAAATCCTAATCTGCTAAGGAAGTTGAAGGAGAATGTAGCATTATTATGGGCTGGTTTGTCAACTTTGCAAGAACTTGAGATTGTATGCAACTCCCACTCACCCATAGTTTTCCTGAGATTAAAGAATTCCACGGGCTCCACAAAGAGCGACCTTCAAATTCTAGAAGATATTGCTGACAAGTTGTTGAAGGAGCATAATGTTTTCGTGGTGGTTTCCAAGAGGTCGGCAGTTGATAAATGTCCCTTACATTTTGGAATCAGACTGTTTGTGTCTGCTGGCCATTCCGAATCTGATCTGCAGAAAGTTCATGAATCATTGAAGGCTGTTGTGCCGTCAGTACTAAAGAATCATTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105196.p1 GENE.S_Transcript_105196~~S_Transcript_105196.p1 ORF type:5prime_partial len:172 (-),score=38.55,Aminotran_1_2|PF00155.17|3.1e-13 S_Transcript_105196:442-957(-)
VMGHALAAEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLATAAISAIDVLDENPNLLRKLKENVALLWAGLSTLQELEIVCNSHSPIVFLRLKNSTGSTKSDLQILEDIADKLLKEHNVFVVVSKRSAVDKCPLHFGIRLFVSAGHSESDLQKVHESLKAVVPSVLKNHF*

Click here to download the sequence:
Link to NCBI Protein BLAST