Transcript Information: S_Transcript_105197.p1


Annotated TAIR IDAT4G36480.1
Annotated Gene Namelong-chain base1
Annotated Gene Symbol(s)ATLCB1, LCB1, EMB2779, FBR11
Annotation TypeOrtholog
Chromosome Positionchr4:17218598-17221124 | Forward length=482
E-Value1.5E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9224569686886
Replicate 27.014181651233
Replicate 37.9954058165898
Condition 2: 8 Hour
Replicate 16.4099439103521
Replicate 27.3710715171354
Replicate 37.6392055000511
Condition 3: 24 Hour
Replicate 110.606764238208
Replicate 28.5153049275294
Replicate 310.2054514934


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105197.p1 GENE.S_Transcript_105197~~S_Transcript_105197.p1 ORF type:5prime_partial len:173 (-),score=38.29,Aminotran_1_2|PF00155.17|1.7e-14 S_Transcript_105197:115-633(-)
GTAATGGGGCATGCGTTAGCTGCTGAGGGAGGATTTTGCACTGGAAGTGCACGAGTAGTTGATCATCAGCGCCTTAGCAGCTCCGGTTATGTATTCTCTGCTTCTTTGCCACCATACCTTGCAACTGCTGCAATATCTGCTATAGATGTCCTTGATGAAAATCCTAATCTGCTAAGGAAGTTGAAGGAGAATGTAGCATTATTATGGGCTGGTTTGTCAACTTTGCAAGAACTTGAGATTGTAAGCAACTCGCACTCACCCATAGTTTTCCTGAAATTAAAGAATTCCACGGGCTCCACAAAGAGCGACCTTCAAATTCTAGAAGATATTGCTGACAAGTTGTTGAAGGAGTATAATGTTTTCGTGGTGGCTTCCAAGAGATCAACAATTGATAAATGCTTATTACCCGTTGGAATCAGATTGTTTGTATCTGCTGGTCATTCTGAATCTGATCTGCAGAAAGTTAGTGAATCATTGAAGGCGGTTGTGCCATTGGTACTAAACAATTATCTTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105197.p1 GENE.S_Transcript_105197~~S_Transcript_105197.p1 ORF type:5prime_partial len:173 (-),score=38.29,Aminotran_1_2|PF00155.17|1.7e-14 S_Transcript_105197:115-633(-)
VMGHALAAEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLATAAISAIDVLDENPNLLRKLKENVALLWAGLSTLQELEIVSNSHSPIVFLKLKNSTGSTKSDLQILEDIADKLLKEYNVFVVASKRSTIDKCLLPVGIRLFVSAGHSESDLQKVSESLKAVVPLVLNNYLG*

Click here to download the sequence:
Link to NCBI Protein BLAST