Transcript Information: S_Transcript_105233.p1


Annotated TAIR IDAT5G47530.1
Annotated Gene NameAuxin-responsive family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19281471-19282870 | Forward length=395
E-Value1E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.19211183420417
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105233.p1 GENE.S_Transcript_105233~~S_Transcript_105233.p1 ORF type:complete len:192 (-),score=26.46,DUF568|PF04526.9|5.3e-25 S_Transcript_105233:846-1421(-)
ATGGCAATGAAGAGAGGCATCAAGAGAGCTATCATGGTGATTGGAACAATCACTTCATTGTTCTTCATATCATCAGCCCAGAACTGTGAAGATTACAAATTTTCAGATAGCAGGGTTTTTTACTCCTGCACTGAACTGCCAGTTCTCCGAGCTAATCTACATTGGAATTACGACTCCTCTGAAAACACACTCCAGATTGCATACAGGGTCAAACAATCACCAGAAGGATGGATTGCATGGGGAATCAACCCAACCTCGAGTGGCATGATTGGAACACAAGCACTGGTTGCTTTCCAGGATCCGAAAGGCAAAATGAAAGTCTACTCGACTCCAATAAGCAGTTACGCCACTATGCTGGAACCAGGACCTCTTACTTTCCCAGTTTCAAAGCTTTCTGCAGAATATGTAAATGATGAGATGATTATCTTTGCTATTCTGGGCCCACTCAGCAATGGAACGACTTTGAACGTCGTCTGGCAAACTGGAAATTCAGTATCAGGTGGCATTCCCCAGGCTCACCCATTTGTTGGACCACATCTTAGATCTTTGGAAGCACTGGATCTCTTACCGGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105233.p1 GENE.S_Transcript_105233~~S_Transcript_105233.p1 ORF type:complete len:192 (-),score=26.46,DUF568|PF04526.9|5.3e-25 S_Transcript_105233:846-1421(-)
MAMKRGIKRAIMVIGTITSLFFISSAQNCEDYKFSDSRVFYSCTELPVLRANLHWNYDSSENTLQIAYRVKQSPEGWIAWGINPTSSGMIGTQALVAFQDPKGKMKVYSTPISSYATMLEPGPLTFPVSKLSAEYVNDEMIIFAILGPLSNGTTLNVVWQTGNSVSGGIPQAHPFVGPHLRSLEALDLLPA*

Click here to download the sequence:
Link to NCBI Protein BLAST