Transcript Information: S_Transcript_10559.p1


Annotated TAIR IDAT5G40340.1
Annotated Gene NameTudor/PWWP/MBT superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:16131654-16134680 | Reverse length=1008
E-Value1.9E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.005221358324
Replicate 213.487441163462
Replicate 313.536272333058
Condition 2: 8 Hour
Replicate 123.29698300683
Replicate 221.654261041849
Replicate 318.963060652356
Condition 3: 24 Hour
Replicate 117.043130798794
Replicate 215.736382377539
Replicate 315.323581695184


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10559.p1 GENE.S_Transcript_10559~~S_Transcript_10559.p1 ORF type:complete len:1060 (+),score=310.60,PWWP|PF00855.13|3.5e+03,PWWP|PF00855.13|9.1e-21,PWWP|PF00855.13|2.5e+03 S_Transcript_10559:303-3482(+)
ATGGAAAATGATGATGAGAAATTATTAGTAGGTGTTAAGACAAAAGACCTAAACGAGTTTGATCAGTCTAAAGACTCAACCTTTGATAAACCCTTGAAAGAAACACAAGAAAAGTTGGAATCTTTGAGTACTAGTGCTAGCAGTGATTTGACTATTTCAGGAACAATTATGGGTGCCCAACTTGCAAAAAGTCAACATGAGAATGGCGGGTTCAAGGTCTTAGATGAAGAGAAAGAGAAAGAAAAAGTAGTGTTTGATGATGGTGGTGGGATTGTTGATGAATTTCATGATGTGGGGGATCAAAAGACAGGTGGTAAAAAGGTTTTTGTTGCTAGTGATGAAAAGAATGGTGAGCATCAGCTCGATCGAGATCGAATAGGGGATGAAAATGTTGATGGGTTGACACAGAAGTTAGAAAGTAGTGACAATGTTGATGGTGGTGGTGGTGGTAGTGAATTGAACATGCCGAGAAGGAGTGGTCGCTTGTCGAAAATTGAGTCTGAGAAAAGCAAGTCTCATATGAATGGGGATATGGACCACAAGAAGGGAATAGATAGTGATACTTTGAGTAGTGTTTCGCAGAGGACGAGGGGGATAGTTACGAGAGGTAAAAAAGAAGAGATTAAAGATGTGGATGTCGAGCAAACAGAATGCGAAAAATGGGATGATGATGAACATGGTCATTTGGGGTTTTCTGTGGGGGATTTTGTTTGGGGAAAAATTAAGAGTCATCCGTGGTGGCCAGGGAGAGTATATAATCCTTCAGATGCATCAGAGTATGCTCTGAAATACAAGCATGAGGGGCGACTCCTTGTTGCCTATTTCGGAGATGGGACTTTTGCTTGGTGTGATTCTTCACAGTTGTTACCTTTTGAGGAGAATTTCGAAGAAATGTCGAAGCAAAGCAACACCAAGAGCTTTGTTCATGCTGTAGAGGAAGTGGTGAATGAATTTGTTACTCTTGTGGAGCTACAATTGAGTGGCGGAAGTCAGAGCTCTCTCCCCGTGGTAGCAAACGCAGGTATCAAACACGGCATTCATGTGCCCTTGTGTGGAGTTGAGAAGTCCTCAGTTGCTCGGTTTGACCCAGCAGAAATGCTTGCTGGTTTAAAGCTTGTGGCAAAATCAGTTTCTGCGGCTAATATGCTTGAGCTTGCAGTGTTCAAGAGTCGAATATCAGCCTTGTGTAATGCTAAGGGTGTTAACTTAGAGTCATACCATGAACCTTTGGGAATTGAAGGCCTTCTGGATAATGAAGATGTACCTAAGAAGAGTTTGGCTCGAGGTCCAGTTGATGGGGACTGGTTTCCAGAGGCAGGGTGTAGCTCACCAACTAGAAATGGACCGGAGACACCAGATGATAAATCACACAAGAAAAGGAAGGAGAAAACCATTGTTGAGCTGCTGGGAAGTGACACAAAAATCGAGTTGGAAGGGGAGACACAATCTGTAAAGTTGGCATCTAGAGGTAGGAAGAAAAAGCAGAGGGTTACTGATGAGGATCAGGCTGCTGAACATGAGCTTAATGGTGATGAATCAGGTAGTGCTAGAATAGCAGAGGATTCAGAGAAACTGGTGTCAAAATCTGGTAGGAAAAGGCGAAAGATCAGTGCTATTGATCAAAGCACTGTGGCAGATGGATTGATTGTTACCAGGTCAAACGCAAGGAAGAAAGAGGCGTCTGCAAGAACCAGTGTCACTGAAAAGAAGGCGTCAAGTGACAAAATGGATGGTAGTTCCAGGAAGGACATACGAAAATTGGCTAGGGTGCCAAGCCTGAAAATCGACAATGGACTGATGACTGAAGAGATGCATGAAAGGGTTTCTCCGAGGGAGAAAAAAAAGAGCAAGTACTTGTCCCCTCCTTACACAAGTCTACAACAGAGGCAGAGAATTTCGACTTTGGGGTCTGAAGCAAGCGGTCTAGAGTTCTCTGACGTCACTAAGATGGGAGAGAGGATGACTAAGGCTGCTGGCAAACTCATGGGATCCCCTCCATTGGTAAAATGCAGTTCTGAAACAATTTGGAGAACCACAAGGGGATCGGCTTCTTCACTTGATAGAACTGATAGCCCCAATCTTCAAACAGGCAAGAAAGACAGGAGTGACCTGGTCAAAGTTTCTGCGAAAAAAGTTGGATCTCCTGACAGTGTGCTTTGTGAAATCCGGTCTGCTGCTCTTGATCCACTATATGCCAGGACTGATGATTCATCCTTTGATACAACCAGGGGCTTTTTGTCTTCTTATAGGAGTTCTCATTACAAAAACGGATTGGACTATAATGTCTACAAGAAACAGTTGGCCAGTCATCAGAAGAGGAAGAGAAATTTGTCAGATGGGAATGTTTTGAATCAGGTTGATGAGCATGCTTCTGAGCCTAAAACGGTCGGAAGGAGATCCACCAGGAAGAAGGATGATCAAGCCTCTGAGCCTAAGTCCGTTGGAAGGAGTTCCTCAGGCAGGAAGAAGGATGAGCATTCCTCTGCACCTAAATCGGTTGGAAGGAGGTCCTCAGCAAGGAAGAATGATGCGAAACCCTCTGAGCCTAAATCCATTGGAAGGAGGTCCTCAGCTAGGAAGAAGGATGAGCAGTCCTCTGATCCTAAATCGGTTAGAAGGAGGCCCAACGGGAAGAAAGAGGGGAAGTCGGATTCCAATGCTGCTCTTGTGATGACTTTTCCTCGAGAGTTCTCCTTGCCATTGAAGGAAGATCTCATCAAAACGCATTCCAAGTTTGGTGTCTTGGATGAGTCAAGAACAGAGGTAGTCCCAGAATCATCAACAGCAAAGGTGGTTTTTGTCGAGAGTTCTGAAGCTGAAACTGCTATGGAAAGTATACAGAAGAACAATCCTTTCGGACCAGCCAATGTGAGCTATGAAATTCAACACCTCACAGCTGTTCCCAAGGCGAGAAAACTCAGTGCACAGAACAAAAAGAAAAGCATAACTGACCCAAAAATGGAAGGAAAATCGCCTGACAAACCACCACCCGCAGCAGCTGAGAATGAACCCTTGGCTGTTGTGTTCATAAAGCAGAAGCTCCAGGGGATGACATCAATGTTAGCTCAAAGCGATGGGAAGATGTCACAGGAGATAAAATCAAACCTTGAGAGCGAGGTGAAGGAGCTCTTGAAGAAGGTGAAGATGATGACTGCTGCTTCGTCTTCTGCTTCATCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10559.p1 GENE.S_Transcript_10559~~S_Transcript_10559.p1 ORF type:complete len:1060 (+),score=310.60,PWWP|PF00855.13|3.5e+03,PWWP|PF00855.13|9.1e-21,PWWP|PF00855.13|2.5e+03 S_Transcript_10559:303-3482(+)
MENDDEKLLVGVKTKDLNEFDQSKDSTFDKPLKETQEKLESLSTSASSDLTISGTIMGAQLAKSQHENGGFKVLDEEKEKEKVVFDDGGGIVDEFHDVGDQKTGGKKVFVASDEKNGEHQLDRDRIGDENVDGLTQKLESSDNVDGGGGGSELNMPRRSGRLSKIESEKSKSHMNGDMDHKKGIDSDTLSSVSQRTRGIVTRGKKEEIKDVDVEQTECEKWDDDEHGHLGFSVGDFVWGKIKSHPWWPGRVYNPSDASEYALKYKHEGRLLVAYFGDGTFAWCDSSQLLPFEENFEEMSKQSNTKSFVHAVEEVVNEFVTLVELQLSGGSQSSLPVVANAGIKHGIHVPLCGVEKSSVARFDPAEMLAGLKLVAKSVSAANMLELAVFKSRISALCNAKGVNLESYHEPLGIEGLLDNEDVPKKSLARGPVDGDWFPEAGCSSPTRNGPETPDDKSHKKRKEKTIVELLGSDTKIELEGETQSVKLASRGRKKKQRVTDEDQAAEHELNGDESGSARIAEDSEKLVSKSGRKRRKISAIDQSTVADGLIVTRSNARKKEASARTSVTEKKASSDKMDGSSRKDIRKLARVPSLKIDNGLMTEEMHERVSPREKKKSKYLSPPYTSLQQRQRISTLGSEASGLEFSDVTKMGERMTKAAGKLMGSPPLVKCSSETIWRTTRGSASSLDRTDSPNLQTGKKDRSDLVKVSAKKVGSPDSVLCEIRSAALDPLYARTDDSSFDTTRGFLSSYRSSHYKNGLDYNVYKKQLASHQKRKRNLSDGNVLNQVDEHASEPKTVGRRSTRKKDDQASEPKSVGRSSSGRKKDEHSSAPKSVGRRSSARKNDAKPSEPKSIGRRSSARKKDEQSSDPKSVRRRPNGKKEGKSDSNAALVMTFPREFSLPLKEDLIKTHSKFGVLDESRTEVVPESSTAKVVFVESSEAETAMESIQKNNPFGPANVSYEIQHLTAVPKARKLSAQNKKKSITDPKMEGKSPDKPPPAAAENEPLAVVFIKQKLQGMTSMLAQSDGKMSQEIKSNLESEVKELLKKVKMMTAASSSASS*

Click here to download the sequence:
Link to NCBI Protein BLAST