Transcript Information: S_Transcript_105590.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38756797915311
Replicate 20.85680736145689
Replicate 30.89527845066022
Condition 2: 8 Hour
Replicate 11.4492983710673
Replicate 21.5204168978455
Replicate 30.72432491861587
Condition 3: 24 Hour
Replicate 11.4846037323705
Replicate 20.88014802238242
Replicate 30.9794968701016


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105590.p1 GENE.S_Transcript_105590~~S_Transcript_105590.p1 ORF type:5prime_partial len:206 (+),score=42.23,RVT_1|PF00078.23|6.6e-27 S_Transcript_105590:2-619(+)
AAGGCAAAAGAAGGCCTTATGGCAATTAAGATTGACATGGCTAAGGCTTATGATAAGCTTGAATGGTCTTTTCTGACTAGAATTCTCAAGGAAGTGGGTTTCTCTGATAAAGTGGTGAAACTGATTGATCAATGCATTAGTACCACATCGTACTCATTACTTATTAATGGGAGACCTTCAAAAGTTTCAAGACCTCAGAGAGGGCTCAGGCAAGGGGATCCTTTATCTCTCTTCCTTTTTGTCATTGCTATGGAGGCTATATCTAGATTAGCTATAGACAAACAAGAGAAAGGTTTGCTACAGGGGATTTCTATTGATAAAAATTGTCAACCAATTTCTCACCTTATGTATGCAGATGATTTGGTTATGTTTGCTAGAGCAAATGAAGAGAATGCAATTGCTATTGCTGATATTTTGCAGACTATGGAGGAATGGAGTGGCCTAGCAGCCAATAAGGCAAAGTCAGGTATTTTCTTCAGCAGCTGCACTAAAGCAGTCAACAAAATGAAGGTTAAATCTCACCTTCATTTTAATAAAATGAGTAAAGACTCGGTTTATCTTGGTTTACCTTTGTTTAGAACCAGGAAGAAGTGTGAAAGATTTACCTTTATCAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105590.p1 GENE.S_Transcript_105590~~S_Transcript_105590.p1 ORF type:5prime_partial len:206 (+),score=42.23,RVT_1|PF00078.23|6.6e-27 S_Transcript_105590:2-619(+)
KAKEGLMAIKIDMAKAYDKLEWSFLTRILKEVGFSDKVVKLIDQCISTTSYSLLINGRPSKVSRPQRGLRQGDPLSLFLFVIAMEAISRLAIDKQEKGLLQGISIDKNCQPISHLMYADDLVMFARANEENAIAIADILQTMEEWSGLAANKAKSGIFFSSCTKAVNKMKVKSHLHFNKMSKDSVYLGLPLFRTRKKCERFTFIK*

Click here to download the sequence:
Link to NCBI Protein BLAST