Transcript Information: S_Transcript_105593.p1


Annotated TAIR IDAT1G43760.1
Annotated Gene NameDNAse I-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16528880-16531065 | Reverse length=626
E-Value4E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2731424348735
Replicate 23.0504821574699
Replicate 33.8397657923252
Condition 2: 8 Hour
Replicate 14.1656510024625
Replicate 23.9924038569287
Replicate 34.455080689144
Condition 3: 24 Hour
Replicate 13.5295993421298
Replicate 23.2793296493107
Replicate 33.2845427601518


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105593.p1 GENE.S_Transcript_105593~~S_Transcript_105593.p1 ORF type:complete len:1244 (+),score=248.65,RVT_1|PF00078.23|4.2e-42,zf-RVT|PF13966.2|2.7e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3.3e-18,Exo_endo_phos|PF03372.19|3.9e-08,Exo_endo_phos|PF03372.19|1.9e+03 S_Transcript_105593:1811-5542(+)
ATGATAGCTCTCATTTGGAATTGTCGGGGGATTGGCCACCCTCAGACACTATTACACTTGAAGGCCCTGGTTAGGACTCATAAACCTGATCTTTTGTTTCTATCTGAGATTATGGTGGATGATGTTAAAGCGAAGGAGATGCTTAGATGTTTGTGGTTTGATAATTTTGAATGTTTTCCTGCTGTAGGGAGGGCTGGTGGGTTAGCTCTACTATGGAATAATAATATTAAAGCTGAAATTATTTTGAAGAGTGATCAGTTATTTGGTATATATGTGGAGGAAGAAGACTCTAGGAATAATTGGTTGCTTAACTGTATCTATAGGGCACCTAATCATAGGGACAGAGCTGCTTTATGGAATGCAGCTGACACTATTTTAGCACACATCAATCTCCCTATGTGTTTCATTGGTGACTTTAATGATATCACTATTCAGCATGAAAGGTGGGGTGGAAATCCTTGGGCGGGTTCATCCCAAGGAGGTTTGAAAGGGTTGATTGATAGGAATGGGTTAATGGATGTTGGTTTCTCTGGGCAATCTTTCACTTGGTTCAGGCGTCAAGGTGGAAAAGTGGTCATGAAAGAGCGGCTCGATCGAGCTGTTTGCAACATTGAATGGAGAGGAATTTTTGATAAAGCTTCAGTTTCTCATTTGCCTGCTATTAAATCATATCATCCTCCTCTAGTTCTGGACACTGTTGGAAGAAAGAATGGAGGTCCTACCCCTTTTCGCTTTGAGGCTATGTGGACTAGGGATGATACCTGTAAATCTCAAGTAGAGGCTGCTTGGAAAGAAGAAGTTATTGGCTCTCACAGCTTCAAACTGAAAAGGAAACTTTGGAACACTAAGATTGCTCTTAAAATTTGGAATAAGGTGTCTTTTGGGCATATCCAGAGTAGGATTAAAGAAGTGATTGGGAAGATTGAAAGGCTGCAACAGGGGACTCCGAATGCCACTTTTGGTGCTCAAGAGCAGGATCTTCTTAATGAACTCACAGAGCTCTACTCGAGGGAGGCAATTATGGCAAGGCAGAAATCCAGGGTAATGTATTTGAAGGAAGGAGATCTTAATACCAAGTTCTTTCACCTCTCTACGATCCAGAGGAGGCGGAGGAATAATATTTGCTCCCTTAAGCAGGATGATGTTTGGCTCACTGATCGAGAGGACATTGCACAGGCTTTTAGGAACTATTATCAAGAGTTATTTGCCTCCTCTTATCCTGCTTTTAACGAGTCTCTCTCTCATCTTTTCCCACAATGTCTGCCTGAGGATGCTAATGGGTGTTTGGAAGCTATTCCTACCCCGGAAGAGGTGGAAGCTGTTGTTAGAAGTATTGGTTCTACTAAAAGTCCGGGACCCGATGGGTTCCCTGCTCTGTTTTATCAAAGTTATTGGGATATTGTTGGCCAACAAGTGGTGAGTATGGTTCAAGCTTTTTTTATTTCTGGTATTTTGCTGAAAGAATTGAATCACACTTTTATTACCCTTGTTCCTAAGAATGAAAAGGCTTGTAAGGTTACTGATTTTAGGTCTATTTCCTTATGCAATGTTACTTATAAAATTATATCAAAAATTTTGGCAAATAGACTTAAAGGGTATCTGAATGGGATCGTGAGCCCTTACCAGGCTGCTTTTGTGCCTGGGAGAGTTATTTCAGATAACACAGTTATGATGAATGAAATTCTGCATGTTATGAGGAAGAGTAAGGCAAAAGAAGGCCTTATGGCCATCAAAATTGATATGGCAAAGGCCTATGATAAGCTGGAATGGGCTTTTCTGACTAGAATCCTTAAGGAGCTGGGGTTCTCTGATAAAGTGGTACAGCTTATTGATCAATGTATTAGTACCACTTCTTATTCAATCCTTATTAATGGGAGACCTTCAGGTGTTCAGGAACCAAGAAGAGGGCTGAGACAAGGGGATCCCCTTTCACCTTTCCTCTTTGTTATTGCGATGGAGGCTATCTCGAGGATGGCTCTTGATAAACAAGAAAAAGGGGTTTTAAAGGGTATTTCTATTGATAAAAATTGTCAGCCTATCACCCATCTTTTGTATGCAGATGATCTTGTTATGTTTGCGAGAGCTAATGAAGAGAATGCTTTAGCCATTGCAGAGATTTTGCAAACTATAGAGGAATGGAGTGGGTTGGCAGCTAATCAAGCCAAGTCAGGGATTTACTTTAGTGCATGTACTAAAGCTGTTAATAGAATGAAGGTTAAATCTCATCTCCATTTCAACAAGATGAATAAAGATTCTGTGTACCTTGGCCTCCCTATGTTCAGAACCAGGAAGAAGTGTGAGAGATTTAATTTTATTAAAGAGAGAGTGGAAAAGAAGATACAGACTTGGAAGGCTAAATCTTTGTCCTTTGCTGCGAGGGCTACTCTTATTCAAGCTGTTGTTGGTACAATACCTTCCTATGCTATGACTACTAATAATCTCCCTAAAAGGGTGTGCACTGAGATTGATGCCAAGCTTAGAGACTTTTGGTGGGGCTTCGACAGAGAAAGGAAAGGTATTTATTTCAAGGCCTGGGAACATATTTGTACCTCAAAAGCGGTAGGGGGATTACAACTGAGGATGATGAAGGATTTCAATGAGGCTCTGCAGGCTAAACTCTTCTGGCAATTTGCTACAGGGGAAAGTAGAATGTGGGTTGACCAACTAAAAAGGAAGTACTGTAGAAGGTTTGGGGTGCTGAAGGTTGAGCCTTGTATAGGAGACTCTATTCAGTGGAGAGAAATTCTGGGAGGAAGGTCCACTGTGCAAGGAGGCATGTGCTACTTAATTGGGAATGGGAAGGAGGTTAATATTTGGACTGATCCTTGGGTTCCTGGTATTCCAGGTTTTAGACCTACTCTTAGAAAAGACTCTGATGTCTTATGTTTCAGAGTTGAAGATCTTATTGAAGGGAGCAACTGGAATGAGGAAAAGGTTAGGACTCACTTTGAGGAGAAAGATGCTGCGGTGATCTTGAATATCAGTTTAGGGGATACACCAGATCAACTCATATGGCTCCCGGAGAGTAAAAGCAATTTTACAGTTAAGAGTGCATATAAGCTGATTCTTCAAAGGAAGGAACTTAGCTCAAGGGCGTTTGATTCCTCATTTTGGAAGGTTATCTGGAAGCTCCATGTTCCTTACAGGATGAGAATGTTCTTGTGGAGGGCTGCTGAGGATTGCTTGCCGCTCAAAGCAAATATTAAAAAGAGGATCGAGGAGGCTGATGATAATTGTGTTCTGTGTGGAACCGGTACTGAATCATTTACTCATACGTTCTTTCTTTGCCGTATTTCCAGACTGATTTGTTTTAAAACTTTGGGTTTGAGAGCAGATTGTGGTATTTTTTGGGATAAGAAACAGTGGTTGGAAAATTGTTTTTGTGCTGATGGCGTTCTCCAACAACCAGGAACTTCTAGGGAGGATGGGCAAAGGAGGATTTGTATTATGATGGACTGTATATGGAGAGAAAGGAATAGATGTTTGCATGAGGGGAGGCCTCCGGACCTGGATTTGGTGATTAATCAATTTGGTAAGTTGTGGGAGGAGATCAAGCTTTGCACAGCCAAAAGCGTACCTCTGCCTCCAGCTTCAACAATGAATCAAATGGGGATTGGGCCTTGTTTTTGCACTGATGCAGCAGTGAGATGGTTTTTCTTTTTGTGGCTGGGTAAGAAGAGATTCTTCGGGATTAGTGTCGAAAGCAGAAATTTTGGTTGTTGGTACAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105593.p1 GENE.S_Transcript_105593~~S_Transcript_105593.p1 ORF type:complete len:1244 (+),score=248.65,RVT_1|PF00078.23|4.2e-42,zf-RVT|PF13966.2|2.7e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|3.3e-18,Exo_endo_phos|PF03372.19|3.9e-08,Exo_endo_phos|PF03372.19|1.9e+03 S_Transcript_105593:1811-5542(+)
MIALIWNCRGIGHPQTLLHLKALVRTHKPDLLFLSEIMVDDVKAKEMLRCLWFDNFECFPAVGRAGGLALLWNNNIKAEIILKSDQLFGIYVEEEDSRNNWLLNCIYRAPNHRDRAALWNAADTILAHINLPMCFIGDFNDITIQHERWGGNPWAGSSQGGLKGLIDRNGLMDVGFSGQSFTWFRRQGGKVVMKERLDRAVCNIEWRGIFDKASVSHLPAIKSYHPPLVLDTVGRKNGGPTPFRFEAMWTRDDTCKSQVEAAWKEEVIGSHSFKLKRKLWNTKIALKIWNKVSFGHIQSRIKEVIGKIERLQQGTPNATFGAQEQDLLNELTELYSREAIMARQKSRVMYLKEGDLNTKFFHLSTIQRRRRNNICSLKQDDVWLTDREDIAQAFRNYYQELFASSYPAFNESLSHLFPQCLPEDANGCLEAIPTPEEVEAVVRSIGSTKSPGPDGFPALFYQSYWDIVGQQVVSMVQAFFISGILLKELNHTFITLVPKNEKACKVTDFRSISLCNVTYKIISKILANRLKGYLNGIVSPYQAAFVPGRVISDNTVMMNEILHVMRKSKAKEGLMAIKIDMAKAYDKLEWAFLTRILKELGFSDKVVQLIDQCISTTSYSILINGRPSGVQEPRRGLRQGDPLSPFLFVIAMEAISRMALDKQEKGVLKGISIDKNCQPITHLLYADDLVMFARANEENALAIAEILQTIEEWSGLAANQAKSGIYFSACTKAVNRMKVKSHLHFNKMNKDSVYLGLPMFRTRKKCERFNFIKERVEKKIQTWKAKSLSFAARATLIQAVVGTIPSYAMTTNNLPKRVCTEIDAKLRDFWWGFDRERKGIYFKAWEHICTSKAVGGLQLRMMKDFNEALQAKLFWQFATGESRMWVDQLKRKYCRRFGVLKVEPCIGDSIQWREILGGRSTVQGGMCYLIGNGKEVNIWTDPWVPGIPGFRPTLRKDSDVLCFRVEDLIEGSNWNEEKVRTHFEEKDAAVILNISLGDTPDQLIWLPESKSNFTVKSAYKLILQRKELSSRAFDSSFWKVIWKLHVPYRMRMFLWRAAEDCLPLKANIKKRIEEADDNCVLCGTGTESFTHTFFLCRISRLICFKTLGLRADCGIFWDKKQWLENCFCADGVLQQPGTSREDGQRRICIMMDCIWRERNRCLHEGRPPDLDLVINQFGKLWEEIKLCTAKSVPLPPASTMNQMGIGPCFCTDAAVRWFFFLWLGKKRFFGISVESRNFGCWYS*

Click here to download the sequence:
Link to NCBI Protein BLAST