Transcript Information: S_Transcript_105684.p1


Annotated TAIR IDAT1G36980.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0220 (InterPro:IPR007919); Has 424 Blast hits to 424 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 228; Fungi - 120; Plants - 62; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:14025084-14026727 | Forward length=135
E-Value8E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 169.272076744514
Replicate 266.35059506635
Replicate 366.854918303052
Condition 2: 8 Hour
Replicate 191.730539231785
Replicate 285.539421269543
Replicate 372.41118818751
Condition 3: 24 Hour
Replicate 173.244609350816
Replicate 259.325859714556
Replicate 368.989709696347


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105684.p1 GENE.S_Transcript_105684~~S_Transcript_105684.p1 ORF type:complete len:136 (+),score=16.75,UPF0220|PF05255.7|1.7e-23 S_Transcript_105684:307-714(+)
ATGGATGTATCGGAACTTTGGGCGATATTCGGGCCGGGTATCGCCGGTGCTGTATTCGGAGCAGGGTGGTGGTTTTGGGTTGATGCCGTCGTTTGCAGTGCCGTTGCTATTTCCTTCGTCCATTATCTTCCTGGGATTTTTGCGTCTTTGGCGGCTTTGATGTTCAATTGTGTAAGAAAAGAGGATATCGATTACTCCCCTTACGATGAAGGCGAGTGGAGATTGAAGCTTTGGCTTTTCCTTGCATATGTCATTTCCTTTGTATCTCTTGCGGCATCAGTTGGGCTATTGATACAAGATGCATTGGTGCCTTCTGGTCCTTCAGCTTGGACAGGAACAGCTGGTGTTTTGCAGTGTGTGTTTGTACTGATCAGTGGACTAATCTATTGGACTTCACATTCGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105684.p1 GENE.S_Transcript_105684~~S_Transcript_105684.p1 ORF type:complete len:136 (+),score=16.75,UPF0220|PF05255.7|1.7e-23 S_Transcript_105684:307-714(+)
MDVSELWAIFGPGIAGAVFGAGWWFWVDAVVCSAVAISFVHYLPGIFASLAALMFNCVRKEDIDYSPYDEGEWRLKLWLFLAYVISFVSLAASVGLLIQDALVPSGPSAWTGTAGVLQCVFVLISGLIYWTSHSE*

Click here to download the sequence:
Link to NCBI Protein BLAST