Transcript Information: S_Transcript_105694.p1


Annotated TAIR IDAT2G41080.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17132857-17134554 | Forward length=565
E-Value6.6E-217
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0135616711989
Replicate 23.0713860172874
Replicate 34.0651042411649
Condition 2: 8 Hour
Replicate 16.2343368444519
Replicate 28.2012809398534
Replicate 35.8358933118046
Condition 3: 24 Hour
Replicate 14.4095240456652
Replicate 23.4179762238111
Replicate 33.6867489501678


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105694.p1 GENE.S_Transcript_105694~~S_Transcript_105694.p1 ORF type:complete len:431 (+),score=77.15,DYW_deaminase|PF14432.2|5.7e-39,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|47,PPR_2|PF13041.2|5.2e-11,PPR_2|PF13041.2|97,PPR_2|PF13041.2|1.5e+02,PPR_2|PF13041.2|3.3e+03,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|1.1e+04,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|0.35,PPR|PF01535.16|2.9e-09,PPR|PF01535.16|0.032,PPR|PF01535.16|0.17,PPR|PF01535.16|14,PPR|PF01535.16|5.6e+02,PPR|PF01535.16|5.1e+02,PPR_3|PF13812.2|76,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|46,PPR_3|PF13812.2|6.9e+03,PPR_3|PF13812.2|33,PPR_1|PF12854.3|8.4,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|3.7e+02,PPR_1|PF12854.3|0.005,PPR_1|PF12854.3|3.2e+02,PPR_1|PF12854.3|8.8,PPR_1|PF12854.3|1.3e+03 S_Transcript_105694:913-2205(+)
ATGTATATGAGATGTAAGAGTTTAAACGAAGGCGAGAATGTTATTAAACAAATGCCTGTTCATAATGTGGTGGCATGCAATATACTCATTGCTGGAAGAGCTCAAAATGGGTGCGCTGAGGGAGCTTTGGAGCAGTATAGTCTGATGAAAAAGGCGGGGTTCCAGCCTGATAAGATTACGTTTGTCAGTGTCCTTAGCTCATGCTCGGAATTGGCCACCCTTGGACAGGGACAACAGATTCATGCTGAGGTGATAAAATGTCGAGCTACTTCAGTAGTTTCTGTGGTTAGTTCACTGATCAGCATGTATTCAAGATGTGGGTGTTTAGAAGACTCTATCAAAGCTTTCAGTCAGCGTAAAGACGAAGATATTGTGTTGTGGAGCTCCATGATCTCTGCATATGGATTCCATGGCAAAGGAGAGGAGGCCATTGAGCTCTTTAACAAAATGTTGCAAAAAGGATTTGAGGCAAATGATGTAACTTTCTTGAGCTTATTGTATGCTTGTAGCCACTGTGGAATGAAAGATAAAGGACTCGAATATCTTGACCTGATGATAAAAGAGTATGGTTTACAGCCTAGGTTAGAACATTATACTTGTGTTGTTGATCTGCTCGGGCGATGTGGTTGCCTGTCACAAGCAGAAGATATGATAAGATCAATGCCCATAAAGGCAGATGCTGTAATATGGAAGACTCTGTTATCTGCATGTAAAATCCATAGGAATTCAGAAATGGCAAAAAGGATGGCTGAAGAGGTTCTCAAGCTTGATCCTATGGATTCTGCTTCCTATGTTTTGCTGTCGAACATCCAGGCCTCTGCTAAGAGGTGGGATGAAGTATCTACTTTGCGAAAAGCCATGAGAGATAGAAGGGTAAAGAAAGAACCAGGAATTAGTTGGTTTGAATTCAAGAATGAGGTTCATCAGTTTGTTATGGGAGACAAATCTCATCCTAGGTGGTCAGAAATCGATTTGTATCTGAAAGAACTAATGTCAGACATAAAGAAATGTGGTTATGTTCCAGATACTGGATCAGTCTTGCATGAATTGGACATTGAAGAAAAGGAGTATAATTTGGCTAACCATAGTGAGAAGTTGGCCATTGCATTTGCTCTAATGATAACTCCCCCTAGCTTTCCTATAAGGTTGATGAAAAACCTGCGTGTTTGTGGTGACTGTCATGCTGCTATCAAGTACATATCTGAGATAAAAAGCAGAGAGATTATTGTACGTGACACCAGTAGATTTCACCATTTCAAGAATGGTAAATGCTCTTGTGGTGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105694.p1 GENE.S_Transcript_105694~~S_Transcript_105694.p1 ORF type:complete len:431 (+),score=77.15,DYW_deaminase|PF14432.2|5.7e-39,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|47,PPR_2|PF13041.2|5.2e-11,PPR_2|PF13041.2|97,PPR_2|PF13041.2|1.5e+02,PPR_2|PF13041.2|3.3e+03,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|1.1e+04,PPR|PF01535.16|3.6e+02,PPR|PF01535.16|0.13,PPR|PF01535.16|0.35,PPR|PF01535.16|2.9e-09,PPR|PF01535.16|0.032,PPR|PF01535.16|0.17,PPR|PF01535.16|14,PPR|PF01535.16|5.6e+02,PPR|PF01535.16|5.1e+02,PPR_3|PF13812.2|76,PPR_3|PF13812.2|1.2e+04,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|46,PPR_3|PF13812.2|6.9e+03,PPR_3|PF13812.2|33,PPR_1|PF12854.3|8.4,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|3.7e+02,PPR_1|PF12854.3|0.005,PPR_1|PF12854.3|3.2e+02,PPR_1|PF12854.3|8.8,PPR_1|PF12854.3|1.3e+03 S_Transcript_105694:913-2205(+)
MYMRCKSLNEGENVIKQMPVHNVVACNILIAGRAQNGCAEGALEQYSLMKKAGFQPDKITFVSVLSSCSELATLGQGQQIHAEVIKCRATSVVSVVSSLISMYSRCGCLEDSIKAFSQRKDEDIVLWSSMISAYGFHGKGEEAIELFNKMLQKGFEANDVTFLSLLYACSHCGMKDKGLEYLDLMIKEYGLQPRLEHYTCVVDLLGRCGCLSQAEDMIRSMPIKADAVIWKTLLSACKIHRNSEMAKRMAEEVLKLDPMDSASYVLLSNIQASAKRWDEVSTLRKAMRDRRVKKEPGISWFEFKNEVHQFVMGDKSHPRWSEIDLYLKELMSDIKKCGYVPDTGSVLHELDIEEKEYNLANHSEKLAIAFALMITPPSFPIRLMKNLRVCGDCHAAIKYISEIKSREIIVRDTSRFHHFKNGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST