Transcript Information: S_Transcript_105761.p1


Annotated TAIR IDAT5G20890.1
Annotated Gene NameTCP-1/cpn60 chaperonin family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7087020-7089906 | Reverse length=527
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 187.449918831512
Replicate 282.06689146015
Replicate 383.551183166615
Condition 2: 8 Hour
Replicate 1111.43324220638
Replicate 2106.68999029324
Replicate 3100.2813739598
Condition 3: 24 Hour
Replicate 173.643736009958
Replicate 268.764064669145
Replicate 380.060883376846


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105761.p1 GENE.S_Transcript_105761~~S_Transcript_105761.p1 ORF type:complete len:528 (+),score=157.93,Cpn60_TCP1|PF00118.20|9.4e-149 S_Transcript_105761:191-1774(+)
ATGGCGGTTGATAAAATTTTGAAAGAAGATGCATCTGAGGAGAAGGGTGAGCGTGCCAGAATGTCAACATTCGTTGGTGCCATTGCGATTACCGACTTGATCAAGACAACTTTGGGTCCAAAGGGAATGGACAAGATTCTGCAGTCAACTGGTCGGGGTCACAATGTCACTGTGACAAATGATGGTGCTACAATCATGAAGTCTCTTCATATTGATAATCCAGCTGCCAAAGTTCTTATTGAAATTTCGAAGACCCAAGATGATGAAGTTGGTGATGGGACTACATCGGTAGTTGTATTGGCTGGAGAGCTGTTAAGAGAGGCTGAGAAACTGTTAGCAATGAAGATTCACCCCATGACTGTAATTTCAGGTTATAGGATGGCTGCTGATTGTGCTCATAATGCATTGTTGAAAAAGGTTGTCGACAATGGCCAAGATGCTGAGAAATTCAGGTCAGACTTGATGAACATTGCTATGACTACATTGAGTTCAAAAATATTGTCCCAAGACAAGGAACACTTTGCCAATATGGCAGTAGATGCAGTTATGAGATTGAAGGGCAGCACAAACTTGGAGGCCATTCAAATTATCAAAAAGCCTGGAGGTTCACTGAGGGATTCATTTCTAGATGAAGGGTTTATTTTGGACAAAAAGATTGGTGTTGGCCAACCAAAACGCATAGAAAATGCAAAAATTTTGGTGGCAAACACAGCCATGGACACAGACAAGGTGAAGATCTATGGGGCACGCGTACGGGTTGATTCAATGTCTAAGGTTGCGGAGATTGAGGGGGCAGAAAAGGAGAAGATGAGAGAGAAAGTGAAGAAGATTATAGGTCATGGAATTAACTGTTTTGTCAATCGGCAGTTGATCTACAATTTCCCTGAGGAACTCTTTGCAGATGCTGGAGTCCTGGCCATTGAGCATGCTGACTTTGATGGTATTGAGCGACTTGCCCTGGTGACTGGTGGTGAGATTGCATCTACATTTGATAATCCTGAATCTGTTAAGCTTGGTCATTGCAAGCTGATTGAGGAAATTATGATTGGAGAAGATAAGTTGATTCATTTCTCTGGTGTGGAAATGGGACAAGCATGCACAATTGTATTGAGAGGTGCCAGTGAGCATGTGCTTGATGAGGCTGAAAGGTCTTTGCATGATGCACTGTGTGTGCTGTCACAGACAGTCAATGACAGCAGGGTTGTGCTTGGTGGCGGGTGGCCTGAAATGGTGATGGCAAAGGAGGTAGATGAATTGGCCAGAAAGACTCCTGGTAAGAAGTCTCACGCCATTGAGGCTTTCTCAAGGGCACTTCAGGCCATACCTACAATAATCGCAGACAACGCTGGGCTGGACAGTGCTGAATTAATCTCAAAGCTTCGCGCAGAGCACCAGAAGGAAGGCTGCAATTCTGGAATCGATGTGATCACTGGAGCTGTTGGGGATATGAAAGAATTAGGGATTTGCGAGGCATTTAAAGTGAAGCAGGCCGTGTTGTTGTCTGCCATAGAGGCAGCTGAGGGGCTTCTCAGGGTTGATGACATCATCACCTGTGCACCAAGGAGAAGAGAGGACAGAATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105761.p1 GENE.S_Transcript_105761~~S_Transcript_105761.p1 ORF type:complete len:528 (+),score=157.93,Cpn60_TCP1|PF00118.20|9.4e-149 S_Transcript_105761:191-1774(+)
MAVDKILKEDASEEKGERARMSTFVGAIAITDLIKTTLGPKGMDKILQSTGRGHNVTVTNDGATIMKSLHIDNPAAKVLIEISKTQDDEVGDGTTSVVVLAGELLREAEKLLAMKIHPMTVISGYRMAADCAHNALLKKVVDNGQDAEKFRSDLMNIAMTTLSSKILSQDKEHFANMAVDAVMRLKGSTNLEAIQIIKKPGGSLRDSFLDEGFILDKKIGVGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKVAEIEGAEKEKMREKVKKIIGHGINCFVNRQLIYNFPEELFADAGVLAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASEHVLDEAERSLHDALCVLSQTVNDSRVVLGGGWPEMVMAKEVDELARKTPGKKSHAIEAFSRALQAIPTIIADNAGLDSAELISKLRAEHQKEGCNSGIDVITGAVGDMKELGICEAFKVKQAVLLSAIEAAEGLLRVDDIITCAPRRREDRM*

Click here to download the sequence:
Link to NCBI Protein BLAST