Transcript Information: S_Transcript_105810.p1


Annotated TAIR IDAT3G55020.1
Annotated Gene NameYpt/Rab-GAP domain of gyp1p superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20389278-20394713 | Reverse length=777
E-Value7E-171
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7877435944243
Replicate 20
Replicate 30.39419588575635
Condition 2: 8 Hour
Replicate 11.2697560646843
Replicate 20.71726537623551
Replicate 31.0739281999456
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.84715263650772


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105810.p1 GENE.S_Transcript_105810~~S_Transcript_105810.p1 ORF type:3prime_partial len:655 (+),score=143.57,RabGAP-TBC|PF00566.14|1.1e-53,RabGAP-TBC|PF00566.14|1.7e+03 S_Transcript_105810:96-2057(+)
ATGGCGGACCAGAATTTGATTTCTCTATCCAACGCTGAGGCCAAAAGGGACTCTTATGGATTCACTGTAAGACCACAACACCTTCAGAGATACAGGGAGTACGGTAACATTTATAAGGAAGAAGAGGAAGAAAGATCTGAAAAGTGGAAGAACTTTCTAGAACAGTGCTCAGAATCTTCTCAGCTGTGTACACCCGCATTCGAGAACTTGGAATCATCAAAAGCAGAAGCTAGCGCAGGGCATACTGAAGCTATCAAAGAGAGTCCTGGGCAAGGGGATGAAACTAGCAGTGACAAGTGTAGACCTGAGGGTGGGGCAGAAGTTGAAATTAAAACAGAGGTTCAAGGGGTCAAAGATACAAAACGCTCTAAGATTCAAACTTGGGCACCAATTAGACTATCACTTGCTGCGATTGAGAAAATGATGAGTGTTCGTGTGAAGAAGAAAGTCTGCCTCGCAAATGAACACACTCTTTTAATGCAAAAAAATCAGCCACCAATTGACGCAGAGAAGAGTGGGAGGAAGAACTCCAGGGAGCACCTTGAGGAGTGTTTGCCAAACAGCGAGGTTGTATCAGAGGAGAGTAATTTAGATCCTGAAGCACTAGATGATTCTGCTGAAAGTAAGAACACCTCAAATGATTCTCACAAAACAAGGGAAATCTCTATCATCCCTGGTCAGGAAAATGGCATACCTGTTAAGTACTCCCAAAATGATGCAACATTGAGTAGTTGGTCTCAAGACAAGGCTGAAAATGATGGAAAGGAAGAATATGCTATTGATCATTTTGTGACTACCGGAACTTTCTTCCCGTGGAAAGAGGAATTCGAATCCCTTGTTCATGGAGGTGTACCAAAGTCTCTGAGGGGAGAGGTCTGGCAAGCTTTTGTTGGTGTGCGGGTGCGAAGGATAGAGAGATATTATCAGGATTTGCTCTGTCAACAACTGGATTCTGGCAGTGATAGCAACAATCCATCCAGTGCCGGCAATAATGGGTCAACCTCATTTGCACCTGAGAAATGGAGAAAGCAGATAGAGAAGGATTTGCCTCGGACATTTCCTGGTCATCCTGCATTGGATGAGGAAGGCAGAAATTCCTTGTGCCGCATACTTACAGCATATGCTCTGCATAATCCCTCTGTTGGATATTGTCAGGCCATGAATTTCTTTGCTGGCTTGTTACTGCTTCTGATGCCAGAGGAGAATGCTTTTTGGACTTTGGTTGGTATTATTGATGGCTTCTTTGATGGATGTTATACACATGACATGATAGAGTCTCAGGTGGATCAGCTTGTTTTTGAGGATTTGATGCGTGAGAGATTTCCTAGGCTAGTTAATCACCTAGATTATTTGGGAGTAGAGGTGGCATGGATATCTGCTCCTTGGTTTCTTTCTATATTTGTGAACACGCTTCCATGGGAGAGCGTTCTACGCATTTGGGATGTTCTTCTCTTTGAAGGAAACCGTGTTATGTTGTTCCGCACCGCACTTGCCTTAATGGAGTTATATGGTCCTGCCCTAGTTACGACAAAGGATGCCGGGGATGCTGTCACCTTGTTGCAGTCTCTCATGGGATCGACATTTGATAGTAGCCAGCTAGTTCTTACTGCTTGTATGGGTTTTCTTGGTGTGACTGAAACTAGACTTGAAGAATTAAGGAGCAAACACCGACCTTCTATTTTGGGAATAGTCGAGGAAAGAACAAAAGGAACTGAGTCCAATGATTCAGCTATATCAACAGCCAAGTCTTCACCGGATACTTTTGATGAATTCATGTGTGACCTGAGTATTGATTCTGAGATCAATTCTCTCCCAGATCTTCAAGACCAGGTAGTTTGGTTGAAAGTTGAATTGTGCCGATTGATGGAGGAGAAAAGATCGGCAACTCTCAGAGCTGAAGAACTGGAGACAGCTTTCCTAGAGATGGTTAAGCAAGACAATCGACGGGAATTAAGTGCAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105810.p1 GENE.S_Transcript_105810~~S_Transcript_105810.p1 ORF type:3prime_partial len:655 (+),score=143.57,RabGAP-TBC|PF00566.14|1.1e-53,RabGAP-TBC|PF00566.14|1.7e+03 S_Transcript_105810:96-2057(+)
MADQNLISLSNAEAKRDSYGFTVRPQHLQRYREYGNIYKEEEEERSEKWKNFLEQCSESSQLCTPAFENLESSKAEASAGHTEAIKESPGQGDETSSDKCRPEGGAEVEIKTEVQGVKDTKRSKIQTWAPIRLSLAAIEKMMSVRVKKKVCLANEHTLLMQKNQPPIDAEKSGRKNSREHLEECLPNSEVVSEESNLDPEALDDSAESKNTSNDSHKTREISIIPGQENGIPVKYSQNDATLSSWSQDKAENDGKEEYAIDHFVTTGTFFPWKEEFESLVHGGVPKSLRGEVWQAFVGVRVRRIERYYQDLLCQQLDSGSDSNNPSSAGNNGSTSFAPEKWRKQIEKDLPRTFPGHPALDEEGRNSLCRILTAYALHNPSVGYCQAMNFFAGLLLLLMPEENAFWTLVGIIDGFFDGCYTHDMIESQVDQLVFEDLMRERFPRLVNHLDYLGVEVAWISAPWFLSIFVNTLPWESVLRIWDVLLFEGNRVMLFRTALALMELYGPALVTTKDAGDAVTLLQSLMGSTFDSSQLVLTACMGFLGVTETRLEELRSKHRPSILGIVEERTKGTESNDSAISTAKSSPDTFDEFMCDLSIDSEINSLPDLQDQVVWLKVELCRLMEEKRSATLRAEELETAFLEMVKQDNRRELSAR

Click here to download the sequence:
Link to NCBI Protein BLAST