Transcript Information: S_Transcript_10588.p1


Annotated TAIR IDAT1G27940.1
Annotated Gene NameP-glycoprotein 13
Annotated Gene Symbol(s)PGP13
Annotation TypeOrtholog
Chromosome Positionchr1:9733597-9738129 | Reverse length=1245
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 129.418844815886
Replicate 242.839170458721
Replicate 337.327390763454
Condition 2: 8 Hour
Replicate 111.463248948427
Replicate 210.346086551439
Replicate 39.091583563147
Condition 3: 24 Hour
Replicate 135.890515447406
Replicate 235.154250863632
Replicate 330.258395124988


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10588.p1 GENE.S_Transcript_10588~~S_Transcript_10588.p1 ORF type:complete len:1252 (+),score=230.44,ABC_membrane|PF00664.19|4.1e-55,ABC_membrane|PF00664.19|3.3e-52,ABC_tran|PF00005.23|1.3e-34,ABC_tran|PF00005.23|8.4e-36,SMC_N|PF02463.15|2.8,SMC_N|PF02463.15|0.0012,SMC_N|PF02463.15|2.4e-05,AAA_21|PF13304.2|0.042,AAA_21|PF13304.2|7.7,AAA_21|PF13304.2|0.16,AAA_21|PF13304.2|0.29,AAA_16|PF13191.2|0.0051,AAA_16|PF13191.2|0.001,AAA_29|PF13555.2|0.0012,AAA_29|PF13555.2|0.0094,AAA_22|PF13401.2|0.011,AAA_22|PF13401.2|0.028,Zeta_toxin|PF06414.8|0.095,Zeta_toxin|PF06414.8|2.4e+02,Zeta_toxin|PF06414.8|0.053,Zeta_toxin|PF06414.8|60,DUF87|PF01935.13|0.019,DUF87|PF01935.13|0.028,AAA_17|PF13207.2|0.003,AAA_17|PF13207.2|0.38,DUF258|PF03193.12|0.086,DUF258|PF03193.12|0.033,ABC_ATPase|PF09818.5|2.6e+03,ABC_ATPase|PF09818.5|0.02,ABC_ATPase|PF09818.5|3.4e+02,ABC_ATPase|PF09818.5|0.023 S_Transcript_10588:447-4202(+)
ATGGAGTTAGCTAGCCGTAGCTCTGAGGGGGATTTTAACCAAGACACAGTTCCGAAAAGGGAAGTTCTAGAGCAAAAACAAGTGTCATGCTTCAAGTTATTTGTAGCTGCTGATAAATTGGATTATTTGTTGATGTTTTTGGCAAGTCTAGGATCAGTTATTCATGGTGCGGCACTCCCAGTTTTCTTTGTGTTGTTTGGCGGTATGATTGATTCTTTGGGGAATTTCTCATCGGATCCTCATAAAATGTCTGCCCGTATATCACAGTATTCTTTGTACCTGGTTTACATTGGGCTGACAGTGTGTATCTCTTCATGGATGGGGGTTGCATTCTGGATGCAAACAGGGGAGAGGCAAACAACTCACTTGCGATCAAGATATTTGGAGGCAGTTTTGAAACAAGGTATTGATTATTTTGACACTGAAGGCCAGAAGAAAAACTTAATCTACCACATTTCTAGTGATGCCATACTGGTACAGGATGCCATAGGCGATAAGATAGGACATAGTCTCCGGTACCTGTCTCAATTCATTGTGGGTTTTCTAGTAGGCTTTTTGACTGTGTGGAAGCTCACACTTCTCACCTTGGCCGTTGTCCCCTTTATGGCTGTCGCTGGTGGTGCTTACACTGTCATTATGTCCACCTTATCACAAAGAGCTGAAGCTGCTTATGCTGAATCCGGGAAGGTTGCTGAAGAGGTTATTTCACAAATTCGAACAGTCTACTCGTTTGTGGGAGAGAGTAGAGCAGTGGAAAGATACTCTAGATCACTTAAAAGAGCCCTAAAATTAGGTGAAAAGACGGGCTTAGCTAAAGGAATTGGTATTGGGCTCACTTATGGACTCCTGTTCTGTTCCTGGGCTTTACTTCTATGGTATGCCAGCATACTTGTCAGACATCGTGAAACTAATGGAGGAAAAGCTTTTACAACAATTGTAAATGTCATCTTCAGTGGATTCGGTCTTGGTCTAGCTGCTCCAAGTCTCGCCACTATTGCTAAAGGCCGAGCTGCTGCTGCAAATATTATACAGATGATTGAAACTGACAGCAACTCCTCTGAAAGGTTGGTGTCTGGAGTAACATTACCAGCAGTATCAGGGGAGATTCAATTAAATGGGGTGTGCTTTGCTTATCCCTCACGCCCGTCTGAGATGATCTTTCAAGGTCTCAGTTTCTCAGTTGCTGCAGGGAAGACTTACGCTATAGTCGGTCCTAGTGGCTCTGGGAAAAGCACAGTTATTTCCTTGGTTCAACGGTTCTATGACCCCTCTTCAGGAAATATACTATTGGATGGACATGATCTACGAGATTTACAGTTAAAGTGGTTGAGAGAACAGATGGGTTTGGTTAGTCAAGAACCAGCACTGTTTGCGACAACTCTAGCAGAAAACATACTGTATGGTATGGAAAATGCAAGCATGGAGCAAGTAGTGGAAGCTGCTAAAGCTGCAAATGCAGATTCATTTATTCAATCTTTGCCTGATGGTTATCATACCCAGGTAGGAGAGGGTGGAACACAGCTTTCCGGTGGACAAAAACAAAGAATTGCAATTTCAAGGGCTGTGATAAGGAACCCAAAGATCTTGCTCTTGGATGAAGCCACGAGTGCTCTTGATGCAGAGTCAGAGCTTGTAGTTCAGAAAGCCTTAGATCAGATCATGTCAGATCGAACAACCATTATTGTGGCTCACAGATTGTCCACCATTCGAGATGTTGATCAAATTGTCGTTCTTAGCAAAGGTGGTGTTGTCGAATGTGGCACTCATGAGGAATTGATGTCAAAAGGAGGGGAATACGCAACATTAGTCAGCTTGCAAGTATCAGAAACCGGTAAGGTTCAAAATGCAAACAGCTATTGTGATCAGCAAACTTCAAAAGTCATGAACAATAGTGAGTCATCCATCAACGTTCATTCCTTGCAAGCAGTGAAGGAAAATTTTAGCAAAGCTCAGAACCTAAGTAAAGAAAATGGGGATTCACAAAAAACAAAAATTCCATCCTTCAAGGAACTTGTTTCTCTAAGCACACCCGAGATTCCATATGCAGTTCTTGGGTCTGTTGGAGCAATTCTCGCAGGCATAGAAGCTCCTCTATTTGCATATGGCATGACGTACATTTTGACAGTGTTCTATTCTCATGATGACTCGAAAATCAGGCACCGTGTGCAACTTGTGGCATTCGTTTTTATTGGGATAGCAGTCCTTACTATTCCCATCTACGTGATGCAGCACTACTTCTATACTCTTATGGGAGAGCGAATCACCAGTCGTGTACGCCTGTCTATGTTTTCAGCAATGCTGTCAAATGAGGCTGGATGGTTTGATTTAGAGGAAAACAATGTGGGTTCACTGACATCAAAGCTTGCAGCTGATGCTACACTTGTTAAAAATTCCTTAGTCGATCGTCTATCAATCATTGTGCAGAATTCAGCTCTTATTGCCGGAGCCTTTGGCATAGCATTCAAGTTGAGCTGGCGCTTTTCAATTGTCACTGTTGCTATGTTTCCACTCCTGATTGGATCTAACATAGCTGAGCAATTTTTCCTCAGGGGATTTGGAGGAGATTACACTAACGCTTACTCTCGAGCCACTGCTCTGGCTCGAGAAGCAATCACAAACATCAGAACAGTAGCAGCATTTGGGACTGAAGAAAGGCTCTCAAAGCAGTTCACCATGCACTTAAACCAGCCAAATAAACAAGCTCTTTTAAGAGGCCACATATCAGGTCTAGGGTATGGCATATCACAGCTACTTGCATTCTGTACATTTGCCCTAACCCTCTGGTATGGTTCTGTTCTGCTGAAACGCGGAGAAACCAGCTTTGGGGATATACTGAAGCCCTTCATGGTATTGCTCATCACAGCCTTTGCAATTGCAGAAGCCCTTGCACTTACACCCGAGATTGTGAAGGGATCGGATGCATTGGGATCAGTATTCACCATCCTTAAGAGGAAAACTGCTATAGATTCTGATAACCCCGAATCACAAATGATTACCGAGGTTGAAGGAACTATCGAGTTCAGAAATGTTAGTTTCAATTACCCAGCAAGACCTGATGTAATGGTTCTCAAGGAACTAAACCTCAAAATCCCTGCAGGGAAGAGTCTAGCAGTTGTAGGCCAAAGTGGGTCAGGAAAGAGCACATTGATCACACTTATAATGAGATTTTACAACCCTACTTGTGGTTCAGTTCTGATCGATGGATTCGATATCAGAACTGTCAATCTGAAGGCTCTCAGAAGGAGGATTGGCTTAGTTCAGCAAGAACCAGCATTGTTCTCCACCACAATATACGAGAACATAAGATATGGAAACGAAAAAGCCACAGAAATCGAGATAATGAAGGCTGCCAAAGCGGCTAATGCTCATGCATTTATCAGCAGAATGCCTGAAGGTTATGACACAGTGGTTGGTGAAAAGGGATCACAGTTATCAGGAGGTCAGAAACAAAGGATTGCCATCGCTCGAGCTATACTCAAAGACCCTTCAATTCTTCTCTTGGATGAAGCAACAAGTGCACTCGATACTTCTTCAGAGAAGCTTGTGCAAGAGGCCCTCGACCAGGTAATGCAGAGACGAACAACCATCATCGTGGCTCACAGGCTATCGACTGTTCGTGATGCAGATAGTATTGCAGTAATGCAGCAAGGGAAATTGGGTGAAATTGGAAGCCATGAGGAACTCACTAAGAACCCTGACAGCTTATATGCTCAACTAGTGAATTTACAGCAGGAAAACAATGAACCAATTTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10588.p1 GENE.S_Transcript_10588~~S_Transcript_10588.p1 ORF type:complete len:1252 (+),score=230.44,ABC_membrane|PF00664.19|4.1e-55,ABC_membrane|PF00664.19|3.3e-52,ABC_tran|PF00005.23|1.3e-34,ABC_tran|PF00005.23|8.4e-36,SMC_N|PF02463.15|2.8,SMC_N|PF02463.15|0.0012,SMC_N|PF02463.15|2.4e-05,AAA_21|PF13304.2|0.042,AAA_21|PF13304.2|7.7,AAA_21|PF13304.2|0.16,AAA_21|PF13304.2|0.29,AAA_16|PF13191.2|0.0051,AAA_16|PF13191.2|0.001,AAA_29|PF13555.2|0.0012,AAA_29|PF13555.2|0.0094,AAA_22|PF13401.2|0.011,AAA_22|PF13401.2|0.028,Zeta_toxin|PF06414.8|0.095,Zeta_toxin|PF06414.8|2.4e+02,Zeta_toxin|PF06414.8|0.053,Zeta_toxin|PF06414.8|60,DUF87|PF01935.13|0.019,DUF87|PF01935.13|0.028,AAA_17|PF13207.2|0.003,AAA_17|PF13207.2|0.38,DUF258|PF03193.12|0.086,DUF258|PF03193.12|0.033,ABC_ATPase|PF09818.5|2.6e+03,ABC_ATPase|PF09818.5|0.02,ABC_ATPase|PF09818.5|3.4e+02,ABC_ATPase|PF09818.5|0.023 S_Transcript_10588:447-4202(+)
MELASRSSEGDFNQDTVPKREVLEQKQVSCFKLFVAADKLDYLLMFLASLGSVIHGAALPVFFVLFGGMIDSLGNFSSDPHKMSARISQYSLYLVYIGLTVCISSWMGVAFWMQTGERQTTHLRSRYLEAVLKQGIDYFDTEGQKKNLIYHISSDAILVQDAIGDKIGHSLRYLSQFIVGFLVGFLTVWKLTLLTLAVVPFMAVAGGAYTVIMSTLSQRAEAAYAESGKVAEEVISQIRTVYSFVGESRAVERYSRSLKRALKLGEKTGLAKGIGIGLTYGLLFCSWALLLWYASILVRHRETNGGKAFTTIVNVIFSGFGLGLAAPSLATIAKGRAAAANIIQMIETDSNSSERLVSGVTLPAVSGEIQLNGVCFAYPSRPSEMIFQGLSFSVAAGKTYAIVGPSGSGKSTVISLVQRFYDPSSGNILLDGHDLRDLQLKWLREQMGLVSQEPALFATTLAENILYGMENASMEQVVEAAKAANADSFIQSLPDGYHTQVGEGGTQLSGGQKQRIAISRAVIRNPKILLLDEATSALDAESELVVQKALDQIMSDRTTIIVAHRLSTIRDVDQIVVLSKGGVVECGTHEELMSKGGEYATLVSLQVSETGKVQNANSYCDQQTSKVMNNSESSINVHSLQAVKENFSKAQNLSKENGDSQKTKIPSFKELVSLSTPEIPYAVLGSVGAILAGIEAPLFAYGMTYILTVFYSHDDSKIRHRVQLVAFVFIGIAVLTIPIYVMQHYFYTLMGERITSRVRLSMFSAMLSNEAGWFDLEENNVGSLTSKLAADATLVKNSLVDRLSIIVQNSALIAGAFGIAFKLSWRFSIVTVAMFPLLIGSNIAEQFFLRGFGGDYTNAYSRATALAREAITNIRTVAAFGTEERLSKQFTMHLNQPNKQALLRGHISGLGYGISQLLAFCTFALTLWYGSVLLKRGETSFGDILKPFMVLLITAFAIAEALALTPEIVKGSDALGSVFTILKRKTAIDSDNPESQMITEVEGTIEFRNVSFNYPARPDVMVLKELNLKIPAGKSLAVVGQSGSGKSTLITLIMRFYNPTCGSVLIDGFDIRTVNLKALRRRIGLVQQEPALFSTTIYENIRYGNEKATEIEIMKAAKAANAHAFISRMPEGYDTVVGEKGSQLSGGQKQRIAIARAILKDPSILLLDEATSALDTSSEKLVQEALDQVMQRRTTIIVAHRLSTVRDADSIAVMQQGKLGEIGSHEELTKNPDSLYAQLVNLQQENNEPIS*

Click here to download the sequence:
Link to NCBI Protein BLAST