Transcript Information: S_Transcript_105891.p2


Annotated TAIR IDAT1G74400.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27963953-27965341 | Forward length=462
E-Value1.3E-138
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9432356505951
Replicate 25.384654902806
Replicate 35.3376385209557
Condition 2: 8 Hour
Replicate 18.3367076617734
Replicate 26.5231092146071
Replicate 37.0899363524128
Condition 3: 24 Hour
Replicate 15.0012044276522
Replicate 26.0208397924206
Replicate 36.754931978908


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105891.p2 GENE.S_Transcript_105891~~S_Transcript_105891.p2 ORF type:complete len:463 (+),score=69.44,PPR|PF01535.16|3e+03,PPR|PF01535.16|0.044,PPR|PF01535.16|0.00011,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|0.016,PPR|PF01535.16|5.3e-07,PPR|PF01535.16|0.076,PPR|PF01535.16|0.0094,PPR|PF01535.16|9,PPR|PF01535.16|7.3e+03,PPR_2|PF13041.2|1.4e+04,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|5.1e-10,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|13,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|2.1e+02,PPR_3|PF13812.2|6.4,PPR_3|PF13812.2|12,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1.3e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|36,PPR_1|PF12854.3|9.5e+02,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|0.0097,PPR_1|PF12854.3|6.7e+02,PPR_1|PF12854.3|0.0057,PPR_1|PF12854.3|62 S_Transcript_105891:2864-4252(+)
ATGATGTATTTCAAATTAATTCGAGGAATGGTTAAAGCTTCTTGCACTAGTCAACCCAAATCTAAGCTTGAACCCTTGCTCAAACCACCCAGAGCAAATCAAACCCTCAAAAGATATCTTGAGGCGGATTCTACTACAAGAGTTCTGGTATTCTTCAGAGAGCTTTGGAGGCAAAATCCTTCTGCTGTGGACAGCTACTCACTTCTGTTTGCGCTCAAGGCCTGTACCCGGGAGTCCTTAATAGTCGAGGGACATCAATTACATGCCAGTGTCAAGAAACTGGGTTGTGAACCCATAATTTTCATCCAAACATGTTTGATAGACTTGTACTCAATGATGGGAAATGTAGATTTAGCCCATCGTATGTTTGATGAAATACCCTGCAAAAATGCTGTCTGCTGGACTTCTCTGATTACTGCTTACATTGATAATGACATGCCTAGCAAAGGAGTTAAAATATTCAAGCAGATGCTGATGAATAAGATAGAGCCTGATCAAGTTACACTAACTGTTGTCCTGACAGCATGTGCTGATCTTGGAGCATTGTCTCTAGGAAAATGGATTCATACTTATATTGGTTGTAAAGATGGACTTACAAGTGACCTCTGCCTGAATAATGCTCTCATCAACATGTATGTCAAGTGTGGAGATGTCAGAACAGCACAGAGATTGTTTTATAGCTCTAGGCGAAAGGATGTATTTACATGGACTTCTATGATTGTAGGGTATGCACCGCATGGACAATGTGTGGAGGCTCTTGATCTGTTTGCAGAAATGAAACAAACAAATAAAAATATCAAGGGAATGTTCTCTGTGATTCCCAATGAAGTCACGTTCTTAGGAGTTCTGATGGCTTGTAGTCATGCTGGGATGGTAGAGGAGGGTAAGCAGCATTTCAAAAGCATGATGCAAGATTATGGACTGTCTCCCAGGCTACCACATTTTGGCTCTATGGTGGATCTCTTCTGCAGAGCTGGGCTCTTGGAAGAGGCTTATGATTTTATTTTGGGTATGCTAGTTCAACCAAATGCAGTCATATGGAGAACATTGCTAGGAGCGTGTTTTCTTCACGGCGATGTTGAGCTGGGTGCAAAGGTCTGGATAAAGCTTCTTGAGCTGGAGCCTACATATGTTGGTGATGATATTGCCCTGTCAAATTTGTTCGCATCAAAAGGTCTTTGGTTCGAGAAAATGATGGTGAGAGATCGAATGGAATGCCGTAGGGCTCCTGGTTGCAGTTCAGTCGAGGTGGAAAGTGATATAATAGAGTTTGTTGCAGGAGACTCTCGTCATCCCCTCAAAGATGAGATTTATAAGGTCCTCAGACAATTGATGGGAACATTAAGGGCGTACAGTATGTCAGAGCCGTCAGATGTCATGGATTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105891.p2 GENE.S_Transcript_105891~~S_Transcript_105891.p2 ORF type:complete len:463 (+),score=69.44,PPR|PF01535.16|3e+03,PPR|PF01535.16|0.044,PPR|PF01535.16|0.00011,PPR|PF01535.16|6.1e+03,PPR|PF01535.16|0.016,PPR|PF01535.16|5.3e-07,PPR|PF01535.16|0.076,PPR|PF01535.16|0.0094,PPR|PF01535.16|9,PPR|PF01535.16|7.3e+03,PPR_2|PF13041.2|1.4e+04,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|5.1e-10,PPR_2|PF13041.2|0.34,PPR_2|PF13041.2|2.6e-06,PPR_2|PF13041.2|13,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|2.1e+02,PPR_3|PF13812.2|6.4,PPR_3|PF13812.2|12,PPR_3|PF13812.2|2.8e+02,PPR_3|PF13812.2|2,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|6.5e+02,PPR_3|PF13812.2|1.3e+02,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|36,PPR_1|PF12854.3|9.5e+02,PPR_1|PF12854.3|7.5,PPR_1|PF12854.3|0.0097,PPR_1|PF12854.3|6.7e+02,PPR_1|PF12854.3|0.0057,PPR_1|PF12854.3|62 S_Transcript_105891:2864-4252(+)
MMYFKLIRGMVKASCTSQPKSKLEPLLKPPRANQTLKRYLEADSTTRVLVFFRELWRQNPSAVDSYSLLFALKACTRESLIVEGHQLHASVKKLGCEPIIFIQTCLIDLYSMMGNVDLAHRMFDEIPCKNAVCWTSLITAYIDNDMPSKGVKIFKQMLMNKIEPDQVTLTVVLTACADLGALSLGKWIHTYIGCKDGLTSDLCLNNALINMYVKCGDVRTAQRLFYSSRRKDVFTWTSMIVGYAPHGQCVEALDLFAEMKQTNKNIKGMFSVIPNEVTFLGVLMACSHAGMVEEGKQHFKSMMQDYGLSPRLPHFGSMVDLFCRAGLLEEAYDFILGMLVQPNAVIWRTLLGACFLHGDVELGAKVWIKLLELEPTYVGDDIALSNLFASKGLWFEKMMVRDRMECRRAPGCSSVEVESDIIEFVAGDSRHPLKDEIYKVLRQLMGTLRAYSMSEPSDVMDY*

Click here to download the sequence:
Link to NCBI Protein BLAST