Transcript Information: S_Transcript_105928.p2


Annotated TAIR IDAT5G27660.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9789835-9792235 | Reverse length=428
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2426523708259
Replicate 23.8370068795678
Replicate 33.0737893472668
Condition 2: 8 Hour
Replicate 13.5542317195222
Replicate 22.9180672138774
Replicate 34.7883425779306
Condition 3: 24 Hour
Replicate 12.6910363720297
Replicate 22.1349967426994
Replicate 32.9242950034917


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105928.p2 GENE.S_Transcript_105928~~S_Transcript_105928.p2 ORF type:complete len:138 (+),score=29.05,PDZ_2|PF13180.2|4.8e-07,PDZ|PF00595.20|4.9e-06 S_Transcript_105928:1000-1413(+)
ATGCCGATTAACATAGCATACAAATGGTGGGAGCATTACAAGAAATATGGGGAACACCGTCGACCTTATTTGGGTATAGAAGCAACAAACCTCTATGTGGCTGATCTTGATGTCATGGAGAAGATAATTCATAAGTTTCCTGGTGTTTGCAAAGGCGTTCTTGTTGAGAAGGTGATACAAGGCTCTTCTGCTGATATTGCTGGACTACATCAGGATGATGTTATAATTCAATGTGATGGACAAAGAATTCAGAGTTTCCTAGAGTTCTTTGAGATAATGTGGGACAAGGTCGGAAATCTTGTGGAATTGGTTGTGGCACGACCAGATCAAGGTGAACTTTTACATCTTAAGATGGTGGTTGCTGACGCTACTTCAGATAAATTCAACAGCTGGCCTCGCAGAGACTGTAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105928.p2 GENE.S_Transcript_105928~~S_Transcript_105928.p2 ORF type:complete len:138 (+),score=29.05,PDZ_2|PF13180.2|4.8e-07,PDZ|PF00595.20|4.9e-06 S_Transcript_105928:1000-1413(+)
MPINIAYKWWEHYKKYGEHRRPYLGIEATNLYVADLDVMEKIIHKFPGVCKGVLVEKVIQGSSADIAGLHQDDVIIQCDGQRIQSFLEFFEIMWDKVGNLVELVVARPDQGELLHLKMVVADATSDKFNSWPRRDCR*

Click here to download the sequence:
Link to NCBI Protein BLAST