Transcript Information: S_Transcript_105930.p1


Annotated TAIR IDAT5G27660.1
Annotated Gene NameTrypsin family protein with PDZ domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:9789835-9792235 | Reverse length=428
E-Value0.0008
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70034213776791
Replicate 21.0160495190961
Replicate 30.91000342517766
Condition 2: 8 Hour
Replicate 11.6134341358357
Replicate 20
Replicate 30.91153295679197
Condition 3: 24 Hour
Replicate 10.86229803252345
Replicate 21.1928321882288
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_105930.p1 GENE.S_Transcript_105930~~S_Transcript_105930.p1 ORF type:complete len:304 (+),score=55.48 S_Transcript_105930:131-913(+)
ATGGCCAGAAGTGCAAAGAAGAGGGTGAGGGAGACGGAGGAGAACCCTTTGGAACGAGTACATGTACCCGAAGGAGATATCCGCCCTACAAGAGATCCCGATGAAATTCGTGCAATAGAATTGGCTCTAAAGCGCCCTAGATTTCAATCATACCACCATAATGTCTACTCGGATATTCAGACCAAGATTGCAGCTCTCAAGGCTTCTCCTTCTGTTGTTTCTCTTGTCTCCTATTTTGGTGAGGTGCAGATAGTTCAGGGTTCTGGTACAATTATTGAAGCTGATGATCAGAACCGTGGTATTGTTCTTACATCAGCCAATCTCATCAGGCGTCCTTCTACTACTGAAGATGAGTTTATTATGGAGAACATTTTAGCCGACAACCTGAGGGTTGTTGTGTACTTATATGATGGTAAATCATATGAGGGTGAAATCTGCACTTATGATTTCCACTACAACCTTGCTGTCATAAGGTTTCAGTCAAATTCTTTACTCACGGCAGCAACATTGAGACACTTGGATGATTCTATCAGCATTGATCCAAGTCGTGATTTCCAACTCCGTCCACATTCAAGTTCATCCCTCCTTCATCCTGGTGATAGAGTGATTGCATTGGGGCGTTATTTTACTGATCCATTTGACCTTATGGCTGCTCCTGGACAATTTAGACTTGATCCTTGTGAATGGGACTGCAAAGAGCTTTTCATGGTGACTTGCTCAACCACAAGAGGAACACTGTCGACCTTCTTTGGGTATAGAAGCGACAAACCTCTATGTGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_105930.p1 GENE.S_Transcript_105930~~S_Transcript_105930.p1 ORF type:complete len:304 (+),score=55.48 S_Transcript_105930:131-913(+)
MARSAKKRVRETEENPLERVHVPEGDIRPTRDPDEIRAIELALKRPRFQSYHHNVYSDIQTKIAALKASPSVVSLVSYFGEVQIVQGSGTIIEADDQNRGIVLTSANLIRRPSTTEDEFIMENILADNLRVVVYLYDGKSYEGEICTYDFHYNLAVIRFQSNSLLTAATLRHLDDSISIDPSRDFQLRPHSSSSLLHPGDRVIALGRYFTDPFDLMAAPGQFRLDPCEWDCKELFMVTCSTTRGTLSTFFGYRSDKPLCG*

Click here to download the sequence:
Link to NCBI Protein BLAST