Transcript Information: S_Transcript_106140.p1


Annotated TAIR IDAT5G66920.1
Annotated Gene NameSKU5 similar 17
Annotated Gene Symbol(s)sks17
Annotation TypeOrtholog
Chromosome Positionchr5:26722963-26725370 | Forward length=546
E-Value3.2E-302
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3957176264685
Replicate 25.7094094973236
Replicate 33.3749184330434
Condition 2: 8 Hour
Replicate 15.2426560299051
Replicate 24.4247464037907
Replicate 36.3435332059187
Condition 3: 24 Hour
Replicate 11.6959059271811
Replicate 24.6081687123812
Replicate 33.7763134876421


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106140.p1 GENE.S_Transcript_106140~~S_Transcript_106140.p1 ORF type:complete len:541 (+),score=86.67,Cu-oxidase_3|PF07732.11|2e-39,Cu-oxidase_3|PF07732.11|1.8e+03,Cu-oxidase|PF00394.18|5.3e+03,Cu-oxidase|PF00394.18|1.6e-36,Cu-oxidase|PF00394.18|8.8e+03,Cu-oxidase_2|PF07731.10|3e+03,Cu-oxidase_2|PF07731.10|1.5e+02,Cu-oxidase_2|PF07731.10|1.2e-26 S_Transcript_106140:274-1896(+)
ATGGAAGAAAGAAGTCGGAATTATTTCATATATGGAGCAGTAGTAGCATTGTTATGCATTTCAGTTGGTGTAAAAGCAGATGACCCATATAGATACTACACTTGGACTGTCACTTATGGTAACATTGCTCCTTTGGGTGTCCCTCAACAGGTGATTCTTATTAATGGTCAATTTCCGGGTCCTAGGATTGACTGTGTCACCAATGACAACATTGTCCTCAATGTTATTAATAAATTGGACGAGCCCTTCCTCTTGACTTGGAATGGAATAAAGCAAAGGAAGAACTCATGGCAAGATGGAGTATTGGGGACCAACTGCCCTATCCCTCCAAACTCAAACTACACCTACAATTTCCAGCCAAAAGATCAGATTGGTTCCTACACATATTTCCCATCAACAGGACTTCACCGAGCAGCTGGTGGCTTCGGAGCCCTTAATGTGTATGCTAGGCCTCGTATCCCAGTCCCATATGCTGAACCTGCTGGTGACTTCACTTTGCTTATAGGTGACTGGCACAAGACTAACTATAAGACTCTGCAAGGAGCTCTGGATGCAGGAAAGGCTCTTCCATTCCCTGATGGCCTGCTTATTAATGGCCAAACTCACAGTTCTTTCACTGGAGATCAAGGCAAAACGTACAGGTTCAGAGTCTCAAATGTGGGATTGTCAACAACATTTAATTTCAGAATCCAGAATCACAAATTGAAGGTGGTTGAAGTTGAAGGATCCAATGTGCTCCAGAATGTGTACGATTCTGTAGATGTGCATGTTGGTCAGTCTCTTACAATACTGGTGACCTTAGATCAGGCTCCCAAGGACTACTTCATTGTCGCATCTACACGGTTCACAAGGATAGTTCACACTGCAACTGCTGCTCTCCACTACTCAAGCTCTCGCTCACCCGCCTCTGGACCTTTGCCTGCTGCCCCAGCTGGCCAATTTCATTGGTCTATGCAGCAAGCCAGAACTTTCAGGTGGAACCTGACGGCAAATGCAGCTAGGCCCAACCCTCAGGGATCTTTCCACTATGGCACAATCCCAATTTCTAAGACCTTTGTCTTAGCCAACTCAGCACCTGTTATCAATGGGAAGCAACGATATGCTGTTAACAGGGTGTCCTTCGTCTACCCTGACACTCCTCTGAAGCTTGCCGATTACTTCAACATTCCTGGAGTCTTCAGCTTGAATTCCATCCAGAGCACCCCATCTGATGGCACTGCAACCGTTGGCACCTCTGTTCTGGGTGCTAGTCTCCATGATTTCATCGAGGTTGTCTTCCAGAACGATGAGAAAGTCATGCAATCTTGGCATCTTGACGGTTATGATTTCTGGGTTGTTGGTTTTGGCGCTGGCAAGTGGACACCTGCCAGTCGAAGGGGTTACAACCTAAAAGATGCTCTCACCAGGCATACCACCCAGGTGTATCCAAACTCATGGACGGCCATATTGGTGTCATTGGACAACCAAGGGATGTGGAACGTGAGGTCGTCAATGTGGGCAAGGCAATACCTAGGACAGCAACTGTATCTCAGGGTGTGGAACCCTGTGAAGAGCTTTGCCAATGAGTATGATCCTCCTACTAACATCCTCCTCTGTGGAAAAGCAGCGGGACAACACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106140.p1 GENE.S_Transcript_106140~~S_Transcript_106140.p1 ORF type:complete len:541 (+),score=86.67,Cu-oxidase_3|PF07732.11|2e-39,Cu-oxidase_3|PF07732.11|1.8e+03,Cu-oxidase|PF00394.18|5.3e+03,Cu-oxidase|PF00394.18|1.6e-36,Cu-oxidase|PF00394.18|8.8e+03,Cu-oxidase_2|PF07731.10|3e+03,Cu-oxidase_2|PF07731.10|1.5e+02,Cu-oxidase_2|PF07731.10|1.2e-26 S_Transcript_106140:274-1896(+)
MEERSRNYFIYGAVVALLCISVGVKADDPYRYYTWTVTYGNIAPLGVPQQVILINGQFPGPRIDCVTNDNIVLNVINKLDEPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYNFQPKDQIGSYTYFPSTGLHRAAGGFGALNVYARPRIPVPYAEPAGDFTLLIGDWHKTNYKTLQGALDAGKALPFPDGLLINGQTHSSFTGDQGKTYRFRVSNVGLSTTFNFRIQNHKLKVVEVEGSNVLQNVYDSVDVHVGQSLTILVTLDQAPKDYFIVASTRFTRIVHTATAALHYSSSRSPASGPLPAAPAGQFHWSMQQARTFRWNLTANAARPNPQGSFHYGTIPISKTFVLANSAPVINGKQRYAVNRVSFVYPDTPLKLADYFNIPGVFSLNSIQSTPSDGTATVGTSVLGASLHDFIEVVFQNDEKVMQSWHLDGYDFWVVGFGAGKWTPASRRGYNLKDALTRHTTQVYPNSWTAILVSLDNQGMWNVRSSMWARQYLGQQLYLRVWNPVKSFANEYDPPTNILLCGKAAGQHH*

Click here to download the sequence:
Link to NCBI Protein BLAST