Transcript Information: S_Transcript_106142.p1


Annotated TAIR IDAT5G66920.1
Annotated Gene NameSKU5 similar 17
Annotated Gene Symbol(s)sks17
Annotation TypeOrtholog
Chromosome Positionchr5:26722963-26725370 | Forward length=546
E-Value6.4E-224
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7949727324619
Replicate 23.9289899212013
Replicate 32.1895485761352
Condition 2: 8 Hour
Replicate 10.82769779769694
Replicate 20
Replicate 31.6059885181835
Condition 3: 24 Hour
Replicate 12.0947148552624
Replicate 20.10348772409291
Replicate 30.69101491520866


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106142.p1 GENE.S_Transcript_106142~~S_Transcript_106142.p1 ORF type:complete len:438 (+),score=71.23,Cu-oxidase|PF00394.18|1.1e-36,Cu-oxidase|PF00394.18|5.5e+03,Cu-oxidase_2|PF07731.10|1e+02,Cu-oxidase_2|PF07731.10|8.2e-27 S_Transcript_106142:452-1765(+)
ATGGAGTATTGGGGACCAACTGCCCTATCCCTCCAAACTCAAACTACACCTACAATTTCCAGCCAAAAGATCAGATTGGTTCCTACACATATTTCCCATCAACAGGCTGGTGGCTTCGGAGCCCTTAATGTGTATGCTAGGCCTCGTATCCCAGTCCCATATGCTGACCCTTCTGGTGACTTCACTTTGCTTATTGGTGACTGGCACAAGACTAATTATAAGACTCTGCAGGGGGCTCTGGATGCAGGAAAGGCTCTTCCATTCCCTGATGGCCTGCTTATTAATGGCCAAACTCACAGTTCTTTCACTGGAGATCAAGGCAAAACGTACAGGTTCAGAGTCTCAAATGTGGGATTGTCAACAACATTTAATTTCAGAATCCAGAATCACAAATTGAAGGTGGTTGAAGTTGAAGGATCCAATGTGCTCCAGAATGTGTACGATTCTGTAGATGTGCATGTTGGTCAGTCTCTTACAATACTGGTGACCTTAGATCAGGCTCCCAAGGACTACTTCATTGTCGCATCTACACGGTTCACAAGGATAGTTCACACTGCAACTGCTGCTCTCCACTACTCAAGCTCTCGCTCACCCGCCTCTGGACCTTTGCCTGCTGCCCCAGCTGGCCAATTTCATTGGTCTATGCAGCAAGCCAGAACTTTCAGGTGGAACCTGACGGCAAATGCAGCTAGGCCCAACCCTCAGGGATCTTTCCACTATGGCACAATCCCAATTTCTAAGACCTTTGTCTTAGCCAACTCAGCACCTGTTATCAATGGGAAGCAACGATATGCTGTTAACAGGGTGTCCTTCGTCTACCCTGACACTCCTCTGAAGCTTGCCGATTACTTCAACATTCCTGGAGTCTTCAGCTTGAATTCCATCCAGAGCACCCCATCTGATGGCACTGCAACCGTTGGCACCTCTGTTCTGGGTGCTAGTCTCCATGATTTCATCGAGGTTGTCTTCCAGAACGATGAGAAAGTCATGCAATCTTGGCATCTTGACGGTTATGATTTCTGGGTTGTTGGTTTTGGCGCTGGCAAGTGGACACCTGCCAGTCGAAGGGGTTACAACCTAAAAGATGCTCTCACCAGGCATACCACCCAGGTGTATCCAAACTCATGGACGGCCATATTGGTGTCATTGGACAACCAAGGGATGTGGAACGTGAGGTCGTCAATGTGGGCAAGGCAATACCTAGGACAGCAACTGTATCTCAGGGTGTGGAACCCTGTGAAGAGCTTTGCCAATGAGTATGATCCTCCTACTAACATCCTCCTCTGTGGAAAAGCAGCGGGACAACACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106142.p1 GENE.S_Transcript_106142~~S_Transcript_106142.p1 ORF type:complete len:438 (+),score=71.23,Cu-oxidase|PF00394.18|1.1e-36,Cu-oxidase|PF00394.18|5.5e+03,Cu-oxidase_2|PF07731.10|1e+02,Cu-oxidase_2|PF07731.10|8.2e-27 S_Transcript_106142:452-1765(+)
MEYWGPTALSLQTQTTPTISSQKIRLVPTHISHQQAGGFGALNVYARPRIPVPYADPSGDFTLLIGDWHKTNYKTLQGALDAGKALPFPDGLLINGQTHSSFTGDQGKTYRFRVSNVGLSTTFNFRIQNHKLKVVEVEGSNVLQNVYDSVDVHVGQSLTILVTLDQAPKDYFIVASTRFTRIVHTATAALHYSSSRSPASGPLPAAPAGQFHWSMQQARTFRWNLTANAARPNPQGSFHYGTIPISKTFVLANSAPVINGKQRYAVNRVSFVYPDTPLKLADYFNIPGVFSLNSIQSTPSDGTATVGTSVLGASLHDFIEVVFQNDEKVMQSWHLDGYDFWVVGFGAGKWTPASRRGYNLKDALTRHTTQVYPNSWTAILVSLDNQGMWNVRSSMWARQYLGQQLYLRVWNPVKSFANEYDPPTNILLCGKAAGQHH*

Click here to download the sequence:
Link to NCBI Protein BLAST