Transcript Information: S_Transcript_106143.p1


Annotated TAIR IDAT5G66920.1
Annotated Gene NameSKU5 similar 17
Annotated Gene Symbol(s)sks17
Annotation TypeOrtholog
Chromosome Positionchr5:26722963-26725370 | Forward length=546
E-Value4.1E-175
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 22.4988242316522
Replicate 31.9869246056918
Condition 2: 8 Hour
Replicate 10
Replicate 20.18540206055022
Replicate 30
Condition 3: 24 Hour
Replicate 10.66379480220038
Replicate 20
Replicate 31.8115280511962


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106143.p1 GENE.S_Transcript_106143~~S_Transcript_106143.p1 ORF type:complete len:362 (+),score=53.55,Cu-oxidase_3|PF07732.11|9.5e-40,Cu-oxidase_3|PF07732.11|9.8e+02,Cu-oxidase|PF00394.18|2.5e+03,Cu-oxidase|PF00394.18|4.5e-37 S_Transcript_106143:274-1359(+)
ATGGAAGAAAGAAGTCGGAATTATTTCATATATGGAGCAGTAGTAGCATTGTTATGCATTTCAGTTGGTGTAAAAGCAGATGACCCATATAGATACTACACTTGGACTGTCACTTATGGTAACATTGCTCCTTTGGGTGTCCCTCAACAGGTGATTCTTATTAATGGTCAATTTCCGGGTCCTAGGATTGACTGTGTCACCAATGACAACATTGTCCTCAATGTTATTAATAAATTGGACGAGCCCTTCCTCTTGACTTGGAATGGAATAAAGCAAAGGAAGAACTCATGGCAAGATGGAGTATTGGGGACCAACTGCCCTATCCCTCCAAACTCAAACTACACCTACAATTTCCAGCCAAAAGATCAGATTGGTTCCTACACATATTTCCCATCAACAGGACTTCACCGAGCAGCTGGTGGCTTCGGAGCCCTTAATGTGTATGCTAGGCCTCGTATCCCAGTCCCATATGCTGAACCTGCTGGTGACTTCACTTTGCTTATAGGTGACTGGCACAAGACTAACTATAAGACTCTGCAAGGAGCTCTGGATGCAGGAAAGGCTCTTCCATTCCCTGATGGCCTGCTTATTAATGGCCAAACTCACAGTTCTTTCACTGGAGATCAAGGCAAAACGTACAGGTTCAGAGTCTCAAATGTGGGATTGTCAACAACATTTAATTTCAGAATCCAGAATCACAAATTGAAGGTGGTTGAAGTTGAAGGATCCAATGTGCTCCAGAATGTGTACGATTCTGTAGATGTGCATGTTGGTCAGTCTCTTACAATACTGGTGACCTTAGATCAGGCTCCCAAGGACTACTTCATTGTCGCATCTACACGGTTCACAAGGATAGTTCACACTGCAACTGCTGCTCTCCGCTACTCAAACTCTCGCTCACCGGCCTCTGGACCTTTGCCTGCTCCCCCAGCTGGCCAATTTCATTGGTCTATGCAGCAAGCCAGAACTTTCAGGATTCCAAAAACTTCTCAATTATCCTATCCTCGTTTGAACGAAATTGAATGTCATGTGTTTTGTTATATGTCTAGAGCTGATCTATATTGGGAAATGGACTCTATCGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106143.p1 GENE.S_Transcript_106143~~S_Transcript_106143.p1 ORF type:complete len:362 (+),score=53.55,Cu-oxidase_3|PF07732.11|9.5e-40,Cu-oxidase_3|PF07732.11|9.8e+02,Cu-oxidase|PF00394.18|2.5e+03,Cu-oxidase|PF00394.18|4.5e-37 S_Transcript_106143:274-1359(+)
MEERSRNYFIYGAVVALLCISVGVKADDPYRYYTWTVTYGNIAPLGVPQQVILINGQFPGPRIDCVTNDNIVLNVINKLDEPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNYTYNFQPKDQIGSYTYFPSTGLHRAAGGFGALNVYARPRIPVPYAEPAGDFTLLIGDWHKTNYKTLQGALDAGKALPFPDGLLINGQTHSSFTGDQGKTYRFRVSNVGLSTTFNFRIQNHKLKVVEVEGSNVLQNVYDSVDVHVGQSLTILVTLDQAPKDYFIVASTRFTRIVHTATAALRYSNSRSPASGPLPAPPAGQFHWSMQQARTFRIPKTSQLSYPRLNEIECHVFCYMSRADLYWEMDSIV*

Click here to download the sequence:
Link to NCBI Protein BLAST