Transcript Information: S_Transcript_106173.p1


Annotated TAIR IDAT2G13600.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:5671493-5673586 | Forward length=697
E-Value2E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7258201729253
Replicate 21.7650231646012
Replicate 33.1352651342121
Condition 2: 8 Hour
Replicate 13.8385702570839
Replicate 24.9218067007399
Replicate 32.3447432365479
Condition 3: 24 Hour
Replicate 11.5291418443416
Replicate 20.9065524630539
Replicate 31.2611022202558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106173.p1 GENE.S_Transcript_106173~~S_Transcript_106173.p1 ORF type:5prime_partial len:100 (+),score=20.48,PPR|PF01535.16|0.012,PPR|PF01535.16|0.11,PPR|PF01535.16|1.6e+03 S_Transcript_106173:3-302(+)
TATGTCTCACTCCTAATGGGTTGCAGCCATGCTGGACTTGTAGTGGAAGGATGCCATTATTTCAACTCCATGAAAAATGATCATGGTATCTGCCCAACTCGTGGACATTATGCTTGCATGGTAGACCTGCTTGGCCGAGCAGGGTTTCTAGAGCAAGCCCTGGTTGTTATAGCAGAAATGCCTTTCCAAGCAACTGATGATGTTTGGGGAGCACTCCTTGCTGCTTGCCGTGCTAATAAAAGCACTAAATTTGCAGAATTTGCTGCAAGACATTTGCTGGAACCTGATGCTTACGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106173.p1 GENE.S_Transcript_106173~~S_Transcript_106173.p1 ORF type:5prime_partial len:100 (+),score=20.48,PPR|PF01535.16|0.012,PPR|PF01535.16|0.11,PPR|PF01535.16|1.6e+03 S_Transcript_106173:3-302(+)
YVSLLMGCSHAGLVVEGCHYFNSMKNDHGICPTRGHYACMVDLLGRAGFLEQALVVIAEMPFQATDDVWGALLAACRANKSTKFAEFAARHLLEPDAYV*

Click here to download the sequence:
Link to NCBI Protein BLAST