Transcript Information: S_Transcript_106263.p1


Annotated TAIR IDAT1G79590.1
Annotated Gene Namesyntaxin of plants 52
Annotated Gene Symbol(s)SYP52, ATSYP52
Annotation TypeHomolog
Chromosome Positionchr1:29947064-29948304 | Forward length=233
E-Value2E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.004428209549
Replicate 232.618693182015
Replicate 332.990239115061
Condition 2: 8 Hour
Replicate 126.932497253965
Replicate 225.746912012099
Replicate 327.931110654803
Condition 3: 24 Hour
Replicate 128.718489071686
Replicate 229.013586371445
Replicate 331.418839797752


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106263.p1 GENE.S_Transcript_106263~~S_Transcript_106263.p1 ORF type:complete len:232 (+),score=37.28,SNARE|PF05739.15|1.2e-09 S_Transcript_106263:153-848(+)
ATGTCTTCTCCTTCTGAGTCATGGATGCGGGAATATAATGAAGCATCAAAGCTTGCTGATGAGATAAATGGTATGGTATCTGAGGCAAGTACTCTGCCTCCTACGGGACCACAAACACAGCGACATTTTTCTGGTACTCGTAGAAAGATCACCATATTAAAGACTAAACTTGATAGTCTGGAGTCTTTTTTGGCAAAGCTACCTAGCATGCAGCCTTTGACAGGAAAAGAGCTAAATAGACGTAATGACTTGCTAACAAATATGAAATCCAAAGTGAACCAGATGGCAAATACTCTCAACTCTTACAGTTCGAGTTACAGGGACCGCTTACTAGGTCCAGATTTGAAGTCAGATGATGTAATGAAGAGAGCATCTAACATGGACAACCAAGGCCTTGTAGGCTTTCAGCGGCAGATTATGAGAGAACAAGATGATGGCCTTGAGAAATTGGAGGAGACAGTATTAAGTACAAAACATATTGCACTTGCTGTCAATGAGGAGCTCCATCTTCACACTAGGCTCCTGGATACATTGGACGATCATGTGGAGTCATCAAACTCCCGTATGCAGCGTATCCAAAGGAGATTGGCCATGCTAAACAAACGCACCAAAGGAGGCTGCTCATGCTTGTGTCTGCTCGTTATCTTGATTGTTGTTCTCATAGTTGCTGTGTTGGTACTGATCAAATACTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106263.p1 GENE.S_Transcript_106263~~S_Transcript_106263.p1 ORF type:complete len:232 (+),score=37.28,SNARE|PF05739.15|1.2e-09 S_Transcript_106263:153-848(+)
MSSPSESWMREYNEASKLADEINGMVSEASTLPPTGPQTQRHFSGTRRKITILKTKLDSLESFLAKLPSMQPLTGKELNRRNDLLTNMKSKVNQMANTLNSYSSSYRDRLLGPDLKSDDVMKRASNMDNQGLVGFQRQIMREQDDGLEKLEETVLSTKHIALAVNEELHLHTRLLDTLDDHVESSNSRMQRIQRRLAMLNKRTKGGCSCLCLLVILIVVLIVAVLVLIKYL*

Click here to download the sequence:
Link to NCBI Protein BLAST