Transcript Information: S_Transcript_106288.p1


Annotated TAIR IDAT1G53750.1
Annotated Gene Nameregulatory particle triple-A 1A
Annotated Gene Symbol(s)RPT1A
Annotation TypeOrtholog
Chromosome Positionchr1:20065921-20068324 | Reverse length=426
E-Value6.5e-310
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1115.30223017584
Replicate 2118.21935013488
Replicate 3118.51725483232
Condition 2: 8 Hour
Replicate 1139.33920136956
Replicate 2123.85726038481
Replicate 3137.08036890698
Condition 3: 24 Hour
Replicate 1107.33153527697
Replicate 2109.1259873559
Replicate 3101.24258573857


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106288.p1 GENE.S_Transcript_106288~~S_Transcript_106288.p1 ORF type:complete len:427 (+),score=94.03,AAA|PF00004.25|1.1e-39,AAA|PF00004.25|3e+03 S_Transcript_106288:88-1368(+)
ATGGCGATAGAGCACGAAGATGAGCTTAAGGACGAGAAGAACCCTCGTCCTCTCGATGAGGACGATATCGCCCTTTTGAAAACTTACGGCTTGGGACCATACTCAACGAGCATTAAGAAAGCGGAGAAGGAGATTAAGGAAATGGCCAAGAAAGTAAACGACTTATGTGGAATCAAAGAATCTGATACTGGTTTAGCAGCTCCTAGCCAATGGGATCTAGTCTCTGATAAGCAAATGATGCAAGAGGAGCAAACTCTGCAGGTCGCTAGATGCACCAAGATAATCAATCCAAACACAGAAGATGCTAAATATGTGATTAATGTTAAGCAGATTGCAAAGTTTGTCGTTGGGCTGGGTGACAAAGTTTCTCCAACTGATATAGAAGAAGGCATGCGTGTTGGGGTTGATAGAAATAAATACCAGATTCAGATACCATTGCCACCAAAAATTGACCCCAGTGTCACAATGATGACAGTGGAAGAGAAACCAGATGTGACTTACAATGATGTAGGTGGATGCAAAGAACAGATTGAAAAGATGAGAGAAGTTGTTGAATTACCGATGCTTCATCCAGAGAAATTTGTGAAGCTAGGGATTGATCCTCCCAAGGGTGTCTTGTGTTACGGTCCTCCTGGAACAGGAAAAACTCTTTTAGCCAGAGCCGTGGCTAACCGAACTGACGCATGTTTTATCCGTGTTATTGGAAGTGAGCTTGTCCAGAAGTATGTTGGTGAGGGTGCTCGAATGGTTCGTGAACTATTTCAGATGGCAAGATCAAAAAAGGCCTGCATTGTATTCTTCGATGAAGTTGATGCCATAGGAGGTGCACGTTTTGATGACGGTGTTGGTGGAGACAATGAGGTACAGCGTACTATGCTTGAGATTGTCAATCAGCTTGATGGGTTCGATGCCCGTGGAAACATCAAAGTTCTTATGGCCACAAATAGGCCTGACACACTTGATCCTGCCCTTTTGCGTCCTGGGCGGTTGGACCGGAAGGTTGAGTTTGGCCTTCCAGATTTAGAGGGTAGGACTCAAATATTCAAGATCCATACAAGGACGATGAACTGTGAAAGGGATATTCGGTTTGAACTCCTTGCTCGCCTTTGCCCCAACTCAACAGGTGCTGATATAAGGAGTGTGTGCACTGAAGCTGGAATGTATGCAATCCGGGCTCGGAGGAAAACTGTGACGGAGAAGGACTTCCTTGATGCGGTAAACAAGGTCATCAAGGGATACCAGAAGTTCAGTGCAACTCCCAAGTACATGGTTTACAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106288.p1 GENE.S_Transcript_106288~~S_Transcript_106288.p1 ORF type:complete len:427 (+),score=94.03,AAA|PF00004.25|1.1e-39,AAA|PF00004.25|3e+03 S_Transcript_106288:88-1368(+)
MAIEHEDELKDEKNPRPLDEDDIALLKTYGLGPYSTSIKKAEKEIKEMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQTLQVARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN*

Click here to download the sequence:
Link to NCBI Protein BLAST