Transcript Information: S_Transcript_106495.p1


Annotated TAIR IDAT1G08460.1
Annotated Gene Namehistone deacetylase 8
Annotated Gene Symbol(s)HDA08, HDA8, ATHDA8
Annotation TypeOrtholog
Chromosome Positionchr1:2672527-2674469 | Forward length=377
E-Value2.8E-198
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.661300123518
Replicate 22.4385188458306
Replicate 34.1738823768149
Condition 2: 8 Hour
Replicate 12.3008973763222
Replicate 22.9436642947009
Replicate 32.019396088893
Condition 3: 24 Hour
Replicate 13.8515978786048
Replicate 21.9085315011661
Replicate 34.5134184724945


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106495.p1 GENE.S_Transcript_106495~~S_Transcript_106495.p1 ORF type:complete len:380 (+),score=69.66,Hist_deacetyl|PF00850.15|1.2e-75 S_Transcript_106495:69-1208(+)
ATGGCAGCTTCAACGGGAGATCGAATTCACGTGTTCTGGGATGAGGGAATGTTGAAGCACGAAACGGGTCGGGGCGTGTTCGATACGGGGTTAGACCCGGGATTCCTAGATGTCCTAGAAAAGCACCCAGAAAATGGGGATAGGGTCCGAAACATGGTATCTATTCTTAAACGGGGCCCCATTTCTAACTTCATTGCCTGGCATCAAGGCAGGCTTGCATCTACTTTTGAGTTGCTCTCCTTTCACTCTCCAGAGTATGTTGAGGAATTGGAAGAAGCAGATAGAGCTGGAGGAAAGATGATCCGTTGTGGAACTTTTCTAAACCCTGGATCCTGGGAAGCTGCTCTCCTTGCTGCTGGTACTACACTGTCAGCTATGAAGTATATACTAGACGGACATGGTGAAATTGCATATGCGTTAGTCAGACCGCCTGGTCATCACGCTCAGCCCACTCAAGCAGACGGATATTGTTTTCTAAACAATGCTGGTCTGGCAGTTAAATTAGCACTGAGCGAAGGTTGCCGTAAAGTTGCTGTTATTGACATTGATGTTCATTATGGGAATGGGACTGCTGAAGGTTTCTACTGTTCGAATGAGGTCTTCACTATTTCACTTCATATGAACCATGGTTCTTGGGGACCTTCTCATCCTCAGAGCGGTACCTTTGATGAGCTTGGTGAAGGAGATGGATTTGGTTATAATATGAACATACCATTGCCTAATGGGAGTGGGGATAGTGGTTATGAGTATGCCATGAAAGAGCTTGTGGTTCCCGCTGTTCAGAAGTTCAAGCCTAATATGATTGTTCTGGTTGTCGGACAGGACTCAAGTGCTTTTGATCCTAATGGAAGGCAGTGGTTGACAATGGATGGATATAGAGAACTGGCACGGATAGTTCGCAGGTTGGCTGATGTGCATTGTAAAGGACAGCTTCTGATTGTCCAGGAAGGTGGCTACCACATTACATATGCAGCTTATTGTCTTCACGCGACACTTGAAGGTGCACTGAATGTCTTGAACCCTCTTCTATCTGATCCCATTGCTTACTACCCTGAGGATGAAGCCTTTACTATCAAGGTTATTGATGGCTTGAAGCAATATTACAAAACAAATGTTCCATTTCTGAAGGATATTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106495.p1 GENE.S_Transcript_106495~~S_Transcript_106495.p1 ORF type:complete len:380 (+),score=69.66,Hist_deacetyl|PF00850.15|1.2e-75 S_Transcript_106495:69-1208(+)
MAASTGDRIHVFWDEGMLKHETGRGVFDTGLDPGFLDVLEKHPENGDRVRNMVSILKRGPISNFIAWHQGRLASTFELLSFHSPEYVEELEEADRAGGKMIRCGTFLNPGSWEAALLAAGTTLSAMKYILDGHGEIAYALVRPPGHHAQPTQADGYCFLNNAGLAVKLALSEGCRKVAVIDIDVHYGNGTAEGFYCSNEVFTISLHMNHGSWGPSHPQSGTFDELGEGDGFGYNMNIPLPNGSGDSGYEYAMKELVVPAVQKFKPNMIVLVVGQDSSAFDPNGRQWLTMDGYRELARIVRRLADVHCKGQLLIVQEGGYHITYAAYCLHATLEGALNVLNPLLSDPIAYYPEDEAFTIKVIDGLKQYYKTNVPFLKDIN*

Click here to download the sequence:
Link to NCBI Protein BLAST