Transcript Information: S_Transcript_106499.p1


Annotated TAIR IDAT1G08460.1
Annotated Gene Namehistone deacetylase 8
Annotated Gene Symbol(s)HDA08, HDA8, ATHDA8
Annotation TypeOrtholog
Chromosome Positionchr1:2672527-2674469 | Forward length=377
E-Value6.9E-158
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3030792399112
Replicate 25.7414861714
Replicate 35.9858003078353
Condition 2: 8 Hour
Replicate 14.8636855109251
Replicate 25.4294252546705
Replicate 33.1163519890324
Condition 3: 24 Hour
Replicate 15.429283908481
Replicate 27.0907246744713
Replicate 37.3011181172705


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106499.p1 GENE.S_Transcript_106499~~S_Transcript_106499.p1 ORF type:complete len:342 (+),score=64.28,Hist_deacetyl|PF00850.15|7.1e-69 S_Transcript_106499:202-1227(+)
ATGGGGATAGGGTCCGAAACATGGTATCTATTCTTAAACGGGGCCCCATTTCTAACTTCATTGCCTGGCATCAAGGCAGGCTTGCATCTACTTTTGAGTTGCTCTCCTTTCACTCTCCAGTTCGGGATATATTCCCTAGAGTATGTTGAGGAATTGGAAGAAGCAGATAGAGCTGGAGGAAAGATGATCCGTTGTGGAACTTTTCTAAACCCTGGATCCTGGGAAGCTGCTCTCCTTGCTGCTGGTACTACACTGTCAGCTATGAAGTATATACTAGACGGACATGGTGAAATTGCATATGCGTTAGTCAGACCGCCTGGTCATCACGCTCAGCCCACTCAAGCAGACGGATATTGTTTTCTAAACAATGCTGGTCTGGCAGTTAAATTAGCACTGAGCGAAGGTTGCCGTAAAGTTGCTGTTATTGACATTGATGTTCATTATGGGAATGGGACTGCTGAAGGTTTCTACTGTTCGAATGAGGTCTTCACTATTTCACTTCATATGAACCATGGTTCTTGGGGACCTTCTCATCCTCAGAGCGGTACCTTTGATGAGCTTGGTGAAGGAGATGGATTTGGTTATAATATGAACATACCATTGCCTAATGGGAGTGGGGATAGTGGTTATGAGTATGCCATGAAAGAGCTTGTGGTTCCCGCTGTTCAGAAGTTCAAGCCTAATATGATTGTTCTGGTTGTCGGACAGGACTCAAGTGCTTTTGATCCTAATGGAAGGCAGTGGTTGACAATGGATGGATATAGAGAACTGGCACGGATAGTTCGCAGGTTGGCTGATGTGCATTGTAAAGGACAGCTTCTGATTGTCCAGGAAGGTGGCTACCACATTACATATGCAGCTTATTGTCTTCACGCGACACTTGAAGGTGCACTGAATGTCTTGAACCCTCTTCTATCTGATCCCATTGCTTACTACCCTGAGGATGAAGCCTTTACTATCAAGGTTATTGATGGCTTGAAGCAATATTACAAAACAAATGTTCCATTTCTGAAGGATATTAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106499.p1 GENE.S_Transcript_106499~~S_Transcript_106499.p1 ORF type:complete len:342 (+),score=64.28,Hist_deacetyl|PF00850.15|7.1e-69 S_Transcript_106499:202-1227(+)
MGIGSETWYLFLNGAPFLTSLPGIKAGLHLLLSCSPFTLQFGIYSLEYVEELEEADRAGGKMIRCGTFLNPGSWEAALLAAGTTLSAMKYILDGHGEIAYALVRPPGHHAQPTQADGYCFLNNAGLAVKLALSEGCRKVAVIDIDVHYGNGTAEGFYCSNEVFTISLHMNHGSWGPSHPQSGTFDELGEGDGFGYNMNIPLPNGSGDSGYEYAMKELVVPAVQKFKPNMIVLVVGQDSSAFDPNGRQWLTMDGYRELARIVRRLADVHCKGQLLIVQEGGYHITYAAYCLHATLEGALNVLNPLLSDPIAYYPEDEAFTIKVIDGLKQYYKTNVPFLKDIN*

Click here to download the sequence:
Link to NCBI Protein BLAST