Transcript Information: S_Transcript_106572.p1


Annotated TAIR IDAT2G23380.1
Annotated Gene NameSET domain-containing protein
Annotated Gene Symbol(s)CLF, ICU1, SDG1, SET1
Annotation TypeOrtholog
Chromosome Positionchr2:9955570-9960117 | Forward length=902
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2121927352548
Replicate 27.9280573464916
Replicate 37.5189616340833
Condition 2: 8 Hour
Replicate 17.9677282503574
Replicate 28.7028949653442
Replicate 38.3389469751356
Condition 3: 24 Hour
Replicate 16.8895401778028
Replicate 26.8738593352438
Replicate 37.0677157398952


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106572.p1 GENE.S_Transcript_106572~~S_Transcript_106572.p1 ORF type:complete len:910 (+),score=191.34,SET|PF00856.24|1.6e+04,SET|PF00856.24|1.7e-09 S_Transcript_106572:429-3158(+)
ATGTCCGCCAAACCCTCCCGCTCCAATTCTGCTTCTATCAGCAGATCGGAGCTCTCCAAGGAGTCGCCGGCGACGAATCCTCCAGAAACGAGTGTGTTGCCGAAGGAGATTATATCGGTGATTGATTCCTTGAAAAAACAAGTTGAAGCTCAACGCCATGTTTATGTCAAGAAAATAATGGAAGATAACAAGCAAAGGCTATCTAGAGTGACCTTAACAAAGGAAAGAGGAAATGGCACGATTAGCGACACTCATGAAAATGCGGGTTTGTTGGTCAAAAGGCAGAGTGATGCAATTAACATGCAGAATGGCATAGATGCAAGTAACAAGGATAATGATTGCAGTGGCTCACAGGAAGACGCAGCGGTTCTTTTAGGATCTAGTATTTCTAATAAGAATGCTGTCCGGCCCATTAGACTTCCTGAAGTGAAGAGATTACCACCTTACACTACTTGGATATTTTTGGACAGAAACCAAAGGATGACAGAAGACCAATCAGTGGTAGGTCGAAGGAGAATTTACTATGATCCAAATGGCGGGGAAGCTTTGATTTGCAGTGATAGTGAGGAGGAAGTAATTGAGGACGAAGAAGACAAGAAGGAATTTGTACAATCGGAAGATTACATCCTTCGAATGACAGTACAGCAGGTTGGGTTATCAGATGCTGTTTTGGATTTACTAGGGCAGTGCTTTTCTCGAAAACCTAGTGATGTAAAGGCAAGATATGAAGTTCTTTGTAAGGAAGAGAAAGCTGTGACAGGTTTAAAGAATAGGGATAACGCCAAGGCTTCAGAAAATGCAAATCCATATCTTGATAAAGATTTAGAAGGAGCTTTGGATTCTTTTGACAACTTGTTCTGCCGAAGATGTTATGTGTTTGACTGTAGATTGCATGGATGTTCACAGGATCTCGTCTTTCCTGCTGAAAAACAACATCCATGGGTTTCTGCGGATGTCAGAATGCCCTGTGGGCCAGACTGTTATAGAACGGCTCCAAAGTCTGAGGGTACTGCTGCAGCAATCTCCCAAGAGTTTAATAACATGGAAGGAAAAGCTGGACCTTTGTCTGGGGATGCATCCATTCTAGTGTCAACTAGGAAGAAGTCAACTGGATCTTCTAGTAAGAAAAAGGGAAAATCCAGTCAAAGTGAAAGTGCCTCATCAAATGCCAAAAATGCATCAGAGAGTAGTGATTCAGATGTTAGACCTGTACAAGATACTAACTCTATTGACCAGGTCTCTGTACAACTTAAGACTAAGTCAGTAGGTAGAATTGGAACTCGCAAAAGTAAGAACAAGCGAGCTGCTGACAGGATACTAGTTGCAATGCAGAAGAGGCAGAAAAAGATGATGACTTCTGATGCTGATTCTGTTATCAGTGGATCCACTGATATGAAACTTCGTTCTCGTTCACGCAAGGAAGATGACGATGAGAGTTCATCTTCACAGAAAAAAATAAATTCAGTTTCTGATGAAAGGTCCAATAAGGCTGGCAGTTCCAAATCCTTAAATTGTACGGTTCTGAGCGATCCTGTGCCTGCAGCAGCCAATGATCTCTCCATAGTTAATTTGGATGACATTTCAAGGAAACAAGAACTTGTAGATGAAAGCCCTGGCAAGCAGGAAGTTAATAATGATAAATCTTGGAAGGCACTCGAGAAAGCACTTTTTGAAAAGGGCTTGGAGATTTTTGGCAGGAATAGTTGCTTGATTGCTAGAAACCTGCTGAATGGGTTGAAGACGTGCTTAGAGGTCTACCAATATATGACACGCTTGGATTGTAAGCTATCTTGTCAAGGTGGCGATAGTGGGAGTAACGGTGACTCTAATGACAACATGGGTAATGAAGTCAAAAGAAGATCAAGATATGTTCGTCGGAGGGGTAGAGTTCGTCGTTTGAAGTATAGTTGGAAGTCTACTGGCTATCATTCCATTAGAAAACGGATTTCAGAGAGGAAAGATCAGCCTTGTCGGCAGTATAATCCTTGTGGGTGTGAATCTGCTTGTGGAAAGCAGTGTCCTTGTATTTTAAATGGAACCTGCTGTGAAAAATATTGTGGGTGTCCTAAGAGCTGCAAAAACAGATTCAGAGGTTGCCATTGTGCAAAAAGTCAATGCAGAAGCCGCCAATGTCCATGTTTTGCTGCTGATAGGGAATGTGATCCAGATGTCTGTAGGAATTGTTGGGTGAGCTGTGGTGATGGTACTCTTGGTACCCCTAATCAAAGAGGTGACAATTATGCATGTAGAAATATGAAGCTTTTGCTCAAGCAACAACAGCGGGTTCTTCTTGGTAGGTCTGATGTGTCTGGGTGGGGAGCATTTCTTAAGAATAGCGTTGGAAAACATGAATACCTTGGGGAGTATACTGGAGAGTTGATCTCACATCGGGAAGCTGATAAACGTGGAAAGATATATGATCGTGAAAACTCTTCGTTTCTCTTCAATCTAAATGATCAGTTTGTTCTTGATGCTTATCGGAAAGGGGACAAGCTTAAGTTCGCCAACCACTCTCCTGATCCGAATTGTTATGCAAAGGTTATTATGGTAGCTGGGGATCATCGAGTGGGTATATTTGCCAAGGAGCGAATAAACGCAGGGGAAGAGCTTTTCTATGATTATCGATATGAGCCTGACAGAGCTCCTGCCTGGGCTAGAAAGCCTGAGGCATCTGGAACTAAAAAAGATGATGCAGGGCCTTCTAGCGGCCGTGCTAAGAAGCTGGCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106572.p1 GENE.S_Transcript_106572~~S_Transcript_106572.p1 ORF type:complete len:910 (+),score=191.34,SET|PF00856.24|1.6e+04,SET|PF00856.24|1.7e-09 S_Transcript_106572:429-3158(+)
MSAKPSRSNSASISRSELSKESPATNPPETSVLPKEIISVIDSLKKQVEAQRHVYVKKIMEDNKQRLSRVTLTKERGNGTISDTHENAGLLVKRQSDAINMQNGIDASNKDNDCSGSQEDAAVLLGSSISNKNAVRPIRLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDPNGGEALICSDSEEEVIEDEEDKKEFVQSEDYILRMTVQQVGLSDAVLDLLGQCFSRKPSDVKARYEVLCKEEKAVTGLKNRDNAKASENANPYLDKDLEGALDSFDNLFCRRCYVFDCRLHGCSQDLVFPAEKQHPWVSADVRMPCGPDCYRTAPKSEGTAAAISQEFNNMEGKAGPLSGDASILVSTRKKSTGSSSKKKGKSSQSESASSNAKNASESSDSDVRPVQDTNSIDQVSVQLKTKSVGRIGTRKSKNKRAADRILVAMQKRQKKMMTSDADSVISGSTDMKLRSRSRKEDDDESSSSQKKINSVSDERSNKAGSSKSLNCTVLSDPVPAAANDLSIVNLDDISRKQELVDESPGKQEVNNDKSWKALEKALFEKGLEIFGRNSCLIARNLLNGLKTCLEVYQYMTRLDCKLSCQGGDSGSNGDSNDNMGNEVKRRSRYVRRRGRVRRLKYSWKSTGYHSIRKRISERKDQPCRQYNPCGCESACGKQCPCILNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGTPNQRGDNYACRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGTKKDDAGPSSGRAKKLA*

Click here to download the sequence:
Link to NCBI Protein BLAST