Transcript Information: S_Transcript_106634.p1


Annotated TAIR IDAT5G15930.1
Annotated Gene Nameplant adhesion molecule 1
Annotated Gene Symbol(s)PAM1
Annotation TypeOrtholog
Chromosome Positionchr5:5200329-5202250 | Forward length=356
E-Value9.5E-209
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8520830766442
Replicate 26.3398820567571
Replicate 36.4443583556489
Condition 2: 8 Hour
Replicate 17.5987022969095
Replicate 28.1772963993484
Replicate 37.3502922775798
Condition 3: 24 Hour
Replicate 17.6331546909662
Replicate 26.3041866683633
Replicate 36.2040431065458


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106634.p1 GENE.S_Transcript_106634~~S_Transcript_106634.p1 ORF type:complete len:435 (+),score=86.27,RabGAP-TBC|PF00566.14|5e-59 S_Transcript_106634:143-1447(+)
ATGATGGAAAAGAAGAAAATCGATGAAAATGAACCCGTAACAGCTCTTTTTCCAAGGCCAGTCGATAGATTCGGGTTCATAAAGCCGGAAACTAGCACTTCTCCTGAAGCTTTAAGGAGGACCAAACCAATTTTCGAATTCGAGAGGGAGGAAAGGAGAGTTCGGAAATGGAGAAAGATGATTGGGGTTGGTGGGAGTGATTGGAAGCACTATGTGAGGAGGAAACCTCATGTGGTTAAGAGACATGTTAGAAAAGGGATTCCTGATTGCTTAAGAGGGCTTGTTTGGCAATTGATCTCGGGTAGTCGGGACCTCTTGCTCATGAATCCTGGGGTTTATGAGCAACTGGTAATCTATGAAACTTCAGCGTCAGAGCTGGACATAATCCGAGATATATCTCGTACGTTCCCATCTCATGTCTTCTTCCAGCAGAGACATGGTCCTGGCCAGAGATCTCTCTATAATGTTCTTAAGGCTTATTCTGTTTATGACAGAGATGTTGGATATGTCCAGGGAATGGGGTTCATAGCTGGTCTACTGCTTCTTTATATGAGTGAAGAAGACGCATTTTGGTTGCTGGTTGCCTTGCTTAAAGGAGCTGTCCATGCCCCGATGGAAGGATTATATCTGTCTGGATTGCCTTTGGTACAGCAATACCTCTTTCAGTTTGATCATTTGGTGAAGGAACACTTGCCTAGACTGGGGGAACATTTTTCCCAAGAGATGATAAACCCGAGCATGTATGCAAGTCAGTGGTTCATCACCGTGTTCTCTTATTCATTCCCCTTCCATTTGGCACTTCGAATTTGGGATGTCTTTCTCTATGAGGGTGTAAAAGTTGTCTTTAGAGTTGGGTTGGCCCTATTGAAGTCTTGTCAGGATGACTTGGTGAAATTACCTTTTGAGAAACTCATTCATGCATTGCGTAATTTTCCTGAAGAAGTGATGGATCCAGATGCCTTGTTACCCTTGGCTTATTCAATCAAGATTTCCAAGCGCTTGGAAGAATTGAGGATTGAATATGAAAAGGTACATGGCAAAGAAGGCCAATCTATAGAATCACGAGGGAAGCAGAAACAGCACTTGGAAAGGAATGGTTCTCGTGTTAGAAAGCAAGCTGAAGAGCGAAATGGTGAAGTCATTCAGTCTGAAGAAGGTACTTGGCATCCAAAACAGCCATTATGGAGGCATTACTCTCAACGTAGAGTGGACCATGGTAAGCTAGATGGGGAAGCAATCCAATCTGATCAAGAATTCTTACAGAGGCGTGATTCTCAGCTTATGGCCAGGCATGCCACTAGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106634.p1 GENE.S_Transcript_106634~~S_Transcript_106634.p1 ORF type:complete len:435 (+),score=86.27,RabGAP-TBC|PF00566.14|5e-59 S_Transcript_106634:143-1447(+)
MMEKKKIDENEPVTALFPRPVDRFGFIKPETSTSPEALRRTKPIFEFEREERRVRKWRKMIGVGGSDWKHYVRRKPHVVKRHVRKGIPDCLRGLVWQLISGSRDLLLMNPGVYEQLVIYETSASELDIIRDISRTFPSHVFFQQRHGPGQRSLYNVLKAYSVYDRDVGYVQGMGFIAGLLLLYMSEEDAFWLLVALLKGAVHAPMEGLYLSGLPLVQQYLFQFDHLVKEHLPRLGEHFSQEMINPSMYASQWFITVFSYSFPFHLALRIWDVFLYEGVKVVFRVGLALLKSCQDDLVKLPFEKLIHALRNFPEEVMDPDALLPLAYSIKISKRLEELRIEYEKVHGKEGQSIESRGKQKQHLERNGSRVRKQAEERNGEVIQSEEGTWHPKQPLWRHYSQRRVDHGKLDGEAIQSDQEFLQRRDSQLMARHATS*

Click here to download the sequence:
Link to NCBI Protein BLAST