Transcript Information: S_Transcript_106664.p1


Annotated TAIR IDAT3G10650.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3325562-3330819 | Reverse length=1309
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.56623406883363
Replicate 21.4082631632456
Replicate 32.1581925204213
Condition 2: 8 Hour
Replicate 13.4029878165638
Replicate 23.5699758467649
Replicate 31.8141146897856
Condition 3: 24 Hour
Replicate 12.5563161531546
Replicate 21.9288350277743
Replicate 31.3415981066551


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106664.p1 GENE.S_Transcript_106664~~S_Transcript_106664.p1 ORF type:5prime_partial len:94 (+),score=31.77 S_Transcript_106664:1-282(+)
ATATCATCTAAGGTGGAGGAAACTAGCATGAAAAAGTTTGAGGTTTCCTCTGATGATGTGGCTACCCAAAATGGTGCTGAGGTTATAGTGCAAACTTCTCATTCATCAGAGAATGACAATGCCAAGCAAATGGACTCTGTAAAATCACAGTCACGTCTTGATCAACCACCAAAAAAGTTGGCATCTCAAATGAGTGCTCATGAGGATTTTCTTGAGCTGGATGATGATGTACATTTTTTTGGGTCTTTGCCAAGAGTATCCACCATCGACTACAGTGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106664.p1 GENE.S_Transcript_106664~~S_Transcript_106664.p1 ORF type:5prime_partial len:94 (+),score=31.77 S_Transcript_106664:1-282(+)
ISSKVEETSMKKFEVSSDDVATQNGAEVIVQTSHSSENDNAKQMDSVKSQSRLDQPPKKLASQMSAHEDFLELDDDVHFFGSLPRVSTIDYSD*

Click here to download the sequence:
Link to NCBI Protein BLAST