Transcript Information: S_Transcript_106858.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value4E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52812685798891
Replicate 20.49493747066038
Replicate 30.41372833319553
Condition 2: 8 Hour
Replicate 10.40479601982479
Replicate 20.84931953420878
Replicate 30.34944012467183
Condition 3: 24 Hour
Replicate 10.39580893296159
Replicate 20.37153789469422
Replicate 30.32642852983325


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106858.p1 GENE.S_Transcript_106858~~S_Transcript_106858.p1 ORF type:5prime_partial len:1159 (+),score=175.41,RVT_1|PF00078.23|1.5e-24,RVT_3|PF13456.2|1.8e-20,rve|PF00665.22|2.4e+03,rve|PF00665.22|3.6e-17,RNase_H|PF00075.20|2.1e-05 S_Transcript_106858:1-3477(+)
TCAGAAACGGTGCGCTTTAAGAGATTGACCATAGTCCTTGAGGACCAACAGGTCAGCATTGAAGATAAGCTAGTGCAGTTTGTGTGTTCATCCAACCATATCACGGTTGAAGACGAGGAAGATGCAAGCTCCGAGTCAGAAACAACTGAGGCACCTCAAACCTTGGAGGACGGAGGGCAAGCTACTGTCGACGAACTTAAGGAGTTAAACCTTGGAACCACCGGGGAACCACGACCAGTCTTCGTCAGCACATCGCTCTCACAAGAGGAGGAAGTGAAGTACACTTCTCTTTTATCTGAATTCAGGGACGTGTTTGCATGGACCTATAAGGAAATGCCTGGCTTGGACCCTAAGGTTGCAATGCATCGACTGGCCATCAGAAAGGAAGTTACCCCTAAAAAACAGCCCAGGCGACGTTTTCGTCCTGAGTTGATTCCAGAAATCGAGACGGAGGTCAATAAGTTGATTGATGCAGGTTTCATCCGGGAAGTCACATACCCAACATGGATCGCAAACATCGTGCCGGTAAGGAAGAAGAATGGCCAACTCCGTGTTTGTGTAGATTTCAGGGATTTAAATGAAGCTTGCCCGAAGGATGACTTCCCATTGCCGGTAACTGAGCTCATGATCGACGCCACCACAGGTCACGAGGCATTGTCTTTTATGGACTGCACTGCCGGATACAACCAAATCCTAATGGCGCCAGAAGATGAGGAAGCCACTGCCTTTCGAACTCCAAAAGGTATCTTCTGCTACAAAGTGATGCCGTTCGGATTGAAAAATGCGGGAGCAACTTACCAGCGCGCCATGCAAACAATCTTCGAAGATGTGATGCACAAGATAATTGAGTGTTATGTGGACGACTTAGTGGTCAAATCTAAGGCAAGGGTCGAGCACCTACAAGATCTCTGCAAGGTCTTTCAAAGGCTGAGGAAGGCTAAGCTCAAGATGAATCCACTCAAGTGCGCCTTTGGAGTCACATCTGGCAAGTTCTTAGGCTTCATTGTTCGTCACAGGGGAATCGAAATTGATCAATCCAAAATTGATGCAATTCAAAACATGCCTCCACCAAGGAACTTAAGAGAGCTTCGAGGGTTGCAAGGGCGCTTGGCGTACATAAGGCGGTTCATCTCAAATTTAGCGGGGCGATGCCAGCCTTTTAGCCATCTCATGAAGAAAAATAACTCTTTCATTTGGGATGATTCCTGTCAAAGGGCCTTCGATAGTATCAAGAGATATCTTTCAAGTCCACCAGTCCTAGGTGCTCCAATTCCAGGAAAACCGTTGATCTTGTATGTTGCTGCGCAGGAGCACTCATTAGGGGCATTATGTGCCCAAGAGGTTGAAAAAGGAAAAGAAAGAGCACTTTACTACCTCAGTCGCACACTTGTTGGAGCTGAGTTGAGATACTCACCAATAGAGAAAATGTGCCTCGCACTCTGCTTTGCCGTCCAAAAGCTAAGGCATTACTTCCAAGCACATACAGTGAGAGTAATCTCCAAAGCTGACCCTATCAAATACATCTTGTCAAGACCAGTTCTTTCAGGAAGGCTCGCCAAATGGGCAGTCCTCATTGAGCAATATGACATTGTTTATGTGCCCCAAAAGGCAGTAAAGGGTCAAGCCTTGGCAGATTTCCTAGCCGATCATCCAATTCCTGCTGAATGGGAGTTGTCGAATGATCTTCCAGGTGAAGACATATTCTTTGTAGAAGTTTTGCCTCCATGGGAGATGTACTTTGACGGCGTTGCACGTAAGGATGGTGCTGGGGCTGGAGTCATCTTTATCTCCCCTGAAAAGCACATTTTACCTTACTCATTTGTGCTGACAAATCTGTGCTCGAACAACATGGCGGAGTACCAAGCGCTCATTCTGGGGCTAGAAATGGCGATTGAAATGAGTATCAAAGACCTTGATGTCTATGGAGATTCCAAGCTAGTGATCAACCAACTACTCAACGAGTTCGAGGTGAAAAAAGATAGTCTGTTGCCTTTTCATAAATATGCCTCACATTTGCTGTCTAAGATTGACATTGTAAGGCTGGAACACGTTCCTAGGAGTACCAATAAGATGGCTGACGCATTGGCAAATCTCGCAGCCACTTTGGCACTGGCGGCAAAAGGCGTCACTACTGTTCCAGTATGCAACAAATGGGTCGTGCCTTCCCTCTACACAGGAATCTTAGATGAGTCTAACGTCATATCGGTATGTGAAATCAATAAAGAAGATTGGCGGCAGCCGCTCATTGATTACTTGGAGCATGGAAAACTCCCAATTGATCCAAGGCATAAGGTAGAGATTCGGCGACGAGCTTCTCGATTCATATACTACAAAGGCACACTCTACAGGCGATCATTCCATGGGCTATGGCTCCGGTGCTTAGGAGAAGAGGAGGCGCAACAGGCGATGGAGGAAGCTCGCTCCGGCATCTGTGGTGCTCATCAGTCTGGTCCAAAACTCTATGATCGAGTCAAAAGAATGGGCTATTTTTGGCAAACCATGGTTGAAGATTGTATGAAATATGCCAAAAGGTGTGTTGCATGCCAATTCCATGCAAACTTCATTCACCAACCGCCAAAACCATTGCATCCAATAGTATCATCCTGGCCTTTTGAAGCATGGGGTCTAGATGTTGTAGGGCCTATCACACCAAAGTCGTCAGGAGGACATGCATACATCCTGGCGGCAACTGACTATTTCTCTAAGTGGGCTGAGGCTGTTGCACTTCGAGAAGTCAAGAAAGAAAACGTGGCAAACTTCATCAGGACGCACATCATCTATCGCTATGGTGTTCCTCGATACATCCTGACTGACAATGGTACTCCATTCGTTAACAAGCTGGTGGACAACCTATGCGAGAAGTTCAATTTTATCCAGCGAACATCATCCATGTACAATGCACCTGCAAATGGACTTGCCGAGGCTTTCAACAAGACACTTTGTAATCTACTAAGCAAGGTAGTAAAAAAGTCACAAAAAGACTGGCATGACAAACTTGGAGAAGTACTATGGGCATACAAAACATCTTGCAAGACTCCCACTCAATCGACTCCTTATGCACTAGTGTATGGTGTCGAGGCGGTTTTCCCCCTCGAACTTCAAATACCGTCACTACGAGTTGCCATCCAAGAAGGCCTTGTAGAAGGAGAAAATGACAAACTTCGCTTGGCTGAGTTGGAAGCATTAGATGAGAAAAGATTGCAGGCTCAACAAAAGCTGGAATGCTATCAAGCCCGTCTGTCTAGGGCGTTTAACAAGAAGGTGAAGCCACGTTCCTTCCAAGCTGGAGATTTAGTGCTAGCAGTGAGAAGACCGATCATCACTAATCGGAAAACTGGGAGCAAGTTCACTTCTAAGTGGGATGGCTCTTATGTTGTTCAAGAAGTCTATACAAATGGTGCCTACAAGATCGTGGATGAAAGGGGATTACAAATTGGCCCGATCAATGGGAAATTCTTGAAGCTTTACTATCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106858.p1 GENE.S_Transcript_106858~~S_Transcript_106858.p1 ORF type:5prime_partial len:1159 (+),score=175.41,RVT_1|PF00078.23|1.5e-24,RVT_3|PF13456.2|1.8e-20,rve|PF00665.22|2.4e+03,rve|PF00665.22|3.6e-17,RNase_H|PF00075.20|2.1e-05 S_Transcript_106858:1-3477(+)
SETVRFKRLTIVLEDQQVSIEDKLVQFVCSSNHITVEDEEDASSESETTEAPQTLEDGGQATVDELKELNLGTTGEPRPVFVSTSLSQEEEVKYTSLLSEFRDVFAWTYKEMPGLDPKVAMHRLAIRKEVTPKKQPRRRFRPELIPEIETEVNKLIDAGFIREVTYPTWIANIVPVRKKNGQLRVCVDFRDLNEACPKDDFPLPVTELMIDATTGHEALSFMDCTAGYNQILMAPEDEEATAFRTPKGIFCYKVMPFGLKNAGATYQRAMQTIFEDVMHKIIECYVDDLVVKSKARVEHLQDLCKVFQRLRKAKLKMNPLKCAFGVTSGKFLGFIVRHRGIEIDQSKIDAIQNMPPPRNLRELRGLQGRLAYIRRFISNLAGRCQPFSHLMKKNNSFIWDDSCQRAFDSIKRYLSSPPVLGAPIPGKPLILYVAAQEHSLGALCAQEVEKGKERALYYLSRTLVGAELRYSPIEKMCLALCFAVQKLRHYFQAHTVRVISKADPIKYILSRPVLSGRLAKWAVLIEQYDIVYVPQKAVKGQALADFLADHPIPAEWELSNDLPGEDIFFVEVLPPWEMYFDGVARKDGAGAGVIFISPEKHILPYSFVLTNLCSNNMAEYQALILGLEMAIEMSIKDLDVYGDSKLVINQLLNEFEVKKDSLLPFHKYASHLLSKIDIVRLEHVPRSTNKMADALANLAATLALAAKGVTTVPVCNKWVVPSLYTGILDESNVISVCEINKEDWRQPLIDYLEHGKLPIDPRHKVEIRRRASRFIYYKGTLYRRSFHGLWLRCLGEEEAQQAMEEARSGICGAHQSGPKLYDRVKRMGYFWQTMVEDCMKYAKRCVACQFHANFIHQPPKPLHPIVSSWPFEAWGLDVVGPITPKSSGGHAYILAATDYFSKWAEAVALREVKKENVANFIRTHIIYRYGVPRYILTDNGTPFVNKLVDNLCEKFNFIQRTSSMYNAPANGLAEAFNKTLCNLLSKVVKKSQKDWHDKLGEVLWAYKTSCKTPTQSTPYALVYGVEAVFPLELQIPSLRVAIQEGLVEGENDKLRLAELEALDEKRLQAQQKLECYQARLSRAFNKKVKPRSFQAGDLVLAVRRPIITNRKTGSKFTSKWDGSYVVQEVYTNGAYKIVDERGLQIGPINGKFLKLYYP*

Click here to download the sequence:
Link to NCBI Protein BLAST