Transcript Information: S_Transcript_106947.p2


Annotated TAIR IDAT5G52230.1
Annotated Gene Namemethyl-CPG-binding domain protein 13
Annotated Gene Symbol(s)MBD13
Annotation TypeHomolog
Chromosome Positionchr5:21208097-21211634 | Reverse length=746
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4193637486528
Replicate 24.5584275945279
Replicate 33.5056440489489
Condition 2: 8 Hour
Replicate 11.2337002662804
Replicate 20.73956524428848
Replicate 31.9378043277256
Condition 3: 24 Hour
Replicate 13.0691158623149
Replicate 24.307997241785
Replicate 35.6280594953565


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106947.p2 GENE.S_Transcript_106947~~S_Transcript_106947.p2 ORF type:complete len:121 (+),score=23.71,MBD|PF01429.15|3.9e-09 S_Transcript_106947:774-1136(+)
ATGGGAGAGCAAATTAGAGGGGAAGATTGGCTGCCTGATGGGTGGAAGGTGGAGATCAGGGTCAGGAAAACTGGCAAAAAAGACAGGTACTACACTGATCCTGTACATGGGTATATATTCCGGTCTTTGAAGGATATTGACCGCTATCTTATAACTGGAAAGTTGGGAAGGCATGTAACCAAGTTTAAGCCAAAGAATTCAGGCAGTAGTGATGTAAAATTGGAAGTCCGTTCACCTCCTGTAAATGGTACAATTCTTTCAAATGCTCTATCTGTAGGAAACCTTTGCTTGAGACAAGAGGGCTCGGATCTGTTTTACACGCCTTGTTCTTCCAAGTGCCTATTAAATGAGAAAATGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106947.p2 GENE.S_Transcript_106947~~S_Transcript_106947.p2 ORF type:complete len:121 (+),score=23.71,MBD|PF01429.15|3.9e-09 S_Transcript_106947:774-1136(+)
MGEQIRGEDWLPDGWKVEIRVRKTGKKDRYYTDPVHGYIFRSLKDIDRYLITGKLGRHVTKFKPKNSGSSDVKLEVRSPPVNGTILSNALSVGNLCLRQEGSDLFYTPCSSKCLLNEKML*

Click here to download the sequence:
Link to NCBI Protein BLAST