Transcript Information: S_Transcript_106952.p1


Annotated TAIR IDAT5G52230.1
Annotated Gene Namemethyl-CPG-binding domain protein 13
Annotated Gene Symbol(s)MBD13
Annotation TypeHomolog
Chromosome Positionchr5:21208097-21211634 | Reverse length=746
E-Value5E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2748743106673
Replicate 20
Replicate 30.16565331811617
Condition 2: 8 Hour
Replicate 10
Replicate 20.7367974102904
Replicate 30
Condition 3: 24 Hour
Replicate 10.58863458507589
Replicate 20.27142289312991
Replicate 31.4347869571773


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106952.p1 GENE.S_Transcript_106952~~S_Transcript_106952.p1 ORF type:complete len:334 (+),score=92.20,MBD|PF01429.15|4.5e-08,MBD|PF01429.15|3.4e+03 S_Transcript_106952:774-1775(+)
ATGGGAGAGCAAATTAGAGGGGAAGATTGGCTGCCTGATGGGTGGAAGGTGGAGATCAGGGTCAGGAAAACTGGCAAAAAAGACAGGTACTACACTGATCCTGTACATGGGTATATATTCCGGTCTTTGAAGGATATTGACCGCTATCTTATAACTGGAAAGTTGGGAAGGCATGTAACCAAGTTTAAGCCAAAGAATTCAGGCAGTAGTGATGTAAAATTGGAAGTCCGTTCACCTCCTGATGTGCCTAAAAAGAAGAAATCGCTCAAGTCAATTGGAACAAAGAAGTTATCTCTGGCAGCTCGAGAACAAAAATCAGCTGCAAATGCATTGAAGCAAGAGGACACCAAAGCTCAAAAATCAGAAGAGATGGAAAAGAAGAAGATCGCCAGTAATCCTTGCAAGGGGAAGACTTCTAAACCTTCCAGGAAAAGGGAGTCCACTCCTTTCTTTATACTTGATTCTGATCAGTGTGAAGAAGGCAATGCAGTCGACATTCCTAACCTAATGGAAATCATAGATTCTATACAGAAGGAACGAGAGGGCCGTAACATGGTTTATGTCTCAGCTCCAGCCATTGGAGCTCTTCTCAGAGAACAAAAGTCAGAAGTAAAGGTTCAACAGGAAGAAGATAGGAAGCCTCCAATTGCTTTACCTCAAATGGCGTTGGGCCTTCGAGCAAACATCAAGCCCAACAGGCCTGTAATAGCTTCTGAATCCCATATGGAGAACAAGGATACTTGGGAATCCAAGATTAACCCTCATCAGGATCCATCTTCTCCAGAGAAGTGCAGGAAAATGATTGATACCAAGAGTGATCATAAAGAAGAGCCAGAATCACAATTTTTCGGGGATTTGTTGAATGATCCATGCTTCGATTTTGCTGTTAAAACTCTCACAGGTGCAATCGATCCGTTGGGAAGTGAGCCCAAGGTAGAGGATTGCTTCCTCCAGCAGCAACTTGGATCAGTGATGGACCTCAAAGGAGGCAGCCCGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106952.p1 GENE.S_Transcript_106952~~S_Transcript_106952.p1 ORF type:complete len:334 (+),score=92.20,MBD|PF01429.15|4.5e-08,MBD|PF01429.15|3.4e+03 S_Transcript_106952:774-1775(+)
MGEQIRGEDWLPDGWKVEIRVRKTGKKDRYYTDPVHGYIFRSLKDIDRYLITGKLGRHVTKFKPKNSGSSDVKLEVRSPPDVPKKKKSLKSIGTKKLSLAAREQKSAANALKQEDTKAQKSEEMEKKKIASNPCKGKTSKPSRKRESTPFFILDSDQCEEGNAVDIPNLMEIIDSIQKEREGRNMVYVSAPAIGALLREQKSEVKVQQEEDRKPPIALPQMALGLRANIKPNRPVIASESHMENKDTWESKINPHQDPSSPEKCRKMIDTKSDHKEEPESQFFGDLLNDPCFDFAVKTLTGAIDPLGSEPKVEDCFLQQQLGSVMDLKGGSPM*

Click here to download the sequence:
Link to NCBI Protein BLAST