Transcript Information: S_Transcript_106956.p1


Annotated TAIR IDAT5G52230.1
Annotated Gene Namemethyl-CPG-binding domain protein 13
Annotated Gene Symbol(s)MBD13
Annotation TypeHomolog
Chromosome Positionchr5:21208097-21211634 | Reverse length=746
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71073297067248
Replicate 20.39280930962934
Replicate 30.054726219832643
Condition 2: 8 Hour
Replicate 10.63280089961819
Replicate 20.39831184521768
Replicate 30.7590212797026
Condition 3: 24 Hour
Replicate 10.32410806365867
Replicate 20.26900666559463
Replicate 31.6465429581975


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_106956.p1 GENE.S_Transcript_106956~~S_Transcript_106956.p1 ORF type:complete len:337 (+),score=91.85,MBD|PF01429.15|3.7e-08,MBD|PF01429.15|3.8e+03 S_Transcript_106956:779-1789(+)
ATGGGAGAGCAAATTAGAGGGGAAGATTGGCTGCCTGATGGGTGGAAGGTGGAGATCAGGGTCAGGAAAACTGGCAAAAAAGACAGGTACTACACTGATCCTGTACATGGGTATATATTCCGGTCTTTGAAGGATATTGACCGCTATCTTATAACTGGAAAGTTGGGAAGGCATGTAACCAAGTTTAAGCCAAAGGATTCAGGCAGTAGCGATGTAAAATTGGAAGTCCGTTCACCTCCTTTGAAACAGGATGTGCCTAAAAAGAAGAAATCGCTGAAGTCAGTTGGAACAAAGAAGTCATCTCTGGCAGATCGAGAACAAAATTCAGCTGCAAATGCATCTAAGCAAGAGGACACCAAAGCTCCAAACTCAAAAGAGATGGAAAAGAAGAAGATTGCCAGTAATCCTTCCAAGGGGAAGACTTCTAAACCTTCCAGGAAAAGGGAGTCCACTCCTTTCTTTATACTTGATTCTGATCAGTGTGAAGAAGGCAATGCAGTCGACATTCCTAACCTAATGGAAATCATAGATTCTATACAGAAGGAACGAGAGGGCCGTAACATGGTTTATGTCTCAGCTCCAGCCATTGGAGCTCTTCTCAGAGAACAAAAGTCAGAAGTAAAGGTTCAACAGGAAGAAGATAGGAAGCCTCCAATTGCTTTACGTCAAATAGCATTGGGCCTTCGAGCAAACTTCAAGCTGAAAGGGCCTGTAATAGGTTCTGAATCCCATATGGAGAAGAAGGATACTCGGGAGTCCAAGATTAACCCTCATCAGGATCCATCTTCTCCAGAGAAGTGCAGGAAAATGATTGATACCAAGAGTGATCATAAAGAAGAGCCAGAATCACAATTTTTCGGGGATTTGTTGAATGATCCATGCTTCGATTTTGCTGTTAAAACTCTCACAGGTGCAATCGATCCGTTGGGAAGTGAGCCCAAGGTAGAGGATTGCTTCCTCCAGCAGCAACTTGGATCAGTGATGGACCTCAAAGGAGGCAGCCCGATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_106956.p1 GENE.S_Transcript_106956~~S_Transcript_106956.p1 ORF type:complete len:337 (+),score=91.85,MBD|PF01429.15|3.7e-08,MBD|PF01429.15|3.8e+03 S_Transcript_106956:779-1789(+)
MGEQIRGEDWLPDGWKVEIRVRKTGKKDRYYTDPVHGYIFRSLKDIDRYLITGKLGRHVTKFKPKDSGSSDVKLEVRSPPLKQDVPKKKKSLKSVGTKKSSLADREQNSAANASKQEDTKAPNSKEMEKKKIASNPSKGKTSKPSRKRESTPFFILDSDQCEEGNAVDIPNLMEIIDSIQKEREGRNMVYVSAPAIGALLREQKSEVKVQQEEDRKPPIALRQIALGLRANFKLKGPVIGSESHMEKKDTRESKINPHQDPSSPEKCRKMIDTKSDHKEEPESQFFGDLLNDPCFDFAVKTLTGAIDPLGSEPKVEDCFLQQQLGSVMDLKGGSPM*

Click here to download the sequence:
Link to NCBI Protein BLAST