Transcript Information: S_Transcript_10706.p1


Annotated TAIR IDAT5G19330.1
Annotated Gene NameARM repeat protein interacting with ABF2
Annotated Gene Symbol(s)ARIA
Annotation TypeOrtholog
Chromosome Positionchr5:6508095-6512701 | Reverse length=710
E-Value7e-308
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9025075249748
Replicate 26.0084542166719
Replicate 34.7834185807609
Condition 2: 8 Hour
Replicate 17.2518618369501
Replicate 27.0597043978388
Replicate 36.6343272084668
Condition 3: 24 Hour
Replicate 17.2396587937128
Replicate 26.2374467018478
Replicate 35.4151075163722


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10706.p1 GENE.S_Transcript_10706~~S_Transcript_10706.p1 ORF type:5prime_partial len:694 (+),score=139.21,Arm|PF00514.19|0.073,Arm|PF00514.19|0.00015,Arm|PF00514.19|3.2e-08,Arm|PF00514.19|1.7e-06,Arm|PF00514.19|0.35,Arm|PF00514.19|0.0006,Arm|PF00514.19|0.017,Arm|PF00514.19|8.5e+02,Arm|PF00514.19|74,Arm|PF00514.19|1.1,HEAT_2|PF13646.2|79,HEAT_2|PF13646.2|28,HEAT_2|PF13646.2|0.00031,HEAT_2|PF13646.2|3.4e-05,HEAT_2|PF13646.2|6.2e-05,HEAT_2|PF13646.2|9.5,HEAT_2|PF13646.2|68,BTB|PF00651.27|7.5e-16,HEAT_EZ|PF13513.2|74,HEAT_EZ|PF13513.2|0.0013,HEAT_EZ|PF13513.2|0.068,HEAT_EZ|PF13513.2|0.017,HEAT_EZ|PF13513.2|2.5e+02,HEAT_EZ|PF13513.2|1.2e+04,HEAT|PF02985.18|1.1e+04,HEAT|PF02985.18|0.084,HEAT|PF02985.18|7.3,HEAT|PF02985.18|21,HEAT|PF02985.18|0.17,HEAT|PF02985.18|95,HEAT|PF02985.18|6.4e+03,HEAT|PF02985.18|3.8e+03,V-ATPase_H_N|PF03224.10|9.3e+02,V-ATPase_H_N|PF03224.10|4.2,V-ATPase_H_N|PF03224.10|0.92,V-ATPase_H_N|PF03224.10|0.02,Atx10homo_assoc|PF09759.5|0.016,Atx10homo_assoc|PF09759.5|27,Atx10homo_assoc|PF09759.5|6.1e+02,Atx10homo_assoc|PF09759.5|95 S_Transcript_10706:2-2083(+)
TTCATCGTCTCCCCCCCGAAAAAAAAAAAGAAAAACAAAAACAAAAGACACAACCCAGACATAATACACAGGAAAAGAATTCTCTATTTTTCACTCACTTTCCCCAAACTACCCCTCTCTCTCTCTCCCCCCATTTCCTCATCCTCTCTTTCTCTCTCCTCTGGTCTGCAGCCTGCCATGGATCGTGGCGAGCGAAGATCAGGGAGCGCTCGAAGGAGCTTAAAACGCAAACTTGAAGAAGATTTTCATGAAAATTTCCACAGCAACGATAACTTCGAAGATCTTCCTCTTTCTGAACGCCAGCACGAGCTTCATAATCATCATCAACATCAACAACATCACAATCATCAAGATCTGAAAGCTGAAATCACTGCTCAAGTTGAAGTTCTCAAAGGAGCTCTTTCGTGGTCCGAAACCGATCGAACTTCCGCTAAACGCGCCTCTCATTTCCTCTCTGAGCTCGCCAAGAACGAGGATTTGGTGAATTTGATTGTGGATTGTGGAGCGGTACCGGCTTTAGTGATGCATCTTCAAGCGCCGAGGCATGAGAGCGTTTCGAAACCTCTTGAGCATGAGGTTGAGAAAGCAAGTGCTTTTGCACTTGGACTTTTGGCTGTTAAGCCGGAGCATCAGCAACTAATAGTCGATGCTGGTGCGTTGCCTCATCTTGTTGCTCTTTTAAAAAGGAGTAAGAACAGCTGTAATTCTCGATCTGTCCATGGCGTCATCAGAAGAGCAGCTGATGCAGTAACTAACCTTGCTCATGAGAATAGTAACATCAAATCTTGTGTCAGGCTTGAAGGTGGCATTCCACCCCTTGTTGAACTCCTAGATTCTTCTGATGTTAAAGTCCAGAGAGCAGCAGCAGGGGCCCTGCGGACCCTTGCATTTAAAAATGATGAAAACAAAAACCAGATTGTTGAATTCAATGCTCTTCCTACCCTAATTTTGATGCTTCGGTCTGAGGATCCCGCTATTCATTATGAAGCGGTTGGTGTAATTGGTAATTTGGTTCACTCCTCTCCTAACATAAAGAAAGAAGTTTTCCTTGCTGGTGCTTTGCAGCCTGTCATTGGGCTACTAAGCTCCACCTGTCCCGAGAGCAAAAGAGAAGCAGCGTTACTACTTGGGCAGTTTGCAGCAGCAGATTCAGATTGCAAGGTGCACATTGTCCAGAGAGGTGCTGTCCCACCTTTAATTAAGATGCTTGAGTCAACAGATACACAACTCATGGAAATGTCAGCTTTTGCACTAGGAAGATTAGCCCAAGATTCACATAATCAAGCTGGCATTGTCCAAAGTGGTGGCATCATGCCATTATTGGAACTTCTTGATTCGAGGAATGGCTCTCTACAACATAATGCTGCATTTGCATTATATGGACTTGCAGACAATGAGGATAATGTTGCAGATCTTATCAAGGTTGGTGGTGTTCAAAAACTCCAGGAAGGGGATTTCATTGTTCAGCCAACTAAGGATTGTGTGGCAAAGACTCTAAAAAGATTGGATGAAAAGATCCAAGGGCGAGTGCTAAACCATTTGTTGTATCTAATGCGAGTAGCGGATAAAATTGTACAAAGTCGGATTGCTTTAGCTCTTGCTCATCTTTGTTCCCCTGAACATCACAGGCGAATCTTCATTGACAACAACGGGTTGCAAGTGCTGCTGGAGCTTCTTGAATCTCCGGATATTAAAGAGCAAGAAGATGGTTCCATGGCCTTGTATAAGATGGCCTGCAAAGCCACAATGCTGTCACCCATTGATGCAGCTCCTCCATCGCCAACCCCGCAGGTATATTTGGGTGTGCAGTATGTAAATAATTCAACGTTGTCAGATGTTACCTTCCTGATTGAAGGTAGGAGGTTTTATGCCCACCGAATATGTCTTCTTGCATCTTCTGATGCATTTCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCCAATGACATTGAGATTCCAAATATTAGATGGAATGTTTTTGAATTGATGATGAGATATATATATATACAGGCTCGGTTAATGTCAATTTGGACATCACACAGGACTTGCTTAGAGCTGCTGACCAGTATCTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10706.p1 GENE.S_Transcript_10706~~S_Transcript_10706.p1 ORF type:5prime_partial len:694 (+),score=139.21,Arm|PF00514.19|0.073,Arm|PF00514.19|0.00015,Arm|PF00514.19|3.2e-08,Arm|PF00514.19|1.7e-06,Arm|PF00514.19|0.35,Arm|PF00514.19|0.0006,Arm|PF00514.19|0.017,Arm|PF00514.19|8.5e+02,Arm|PF00514.19|74,Arm|PF00514.19|1.1,HEAT_2|PF13646.2|79,HEAT_2|PF13646.2|28,HEAT_2|PF13646.2|0.00031,HEAT_2|PF13646.2|3.4e-05,HEAT_2|PF13646.2|6.2e-05,HEAT_2|PF13646.2|9.5,HEAT_2|PF13646.2|68,BTB|PF00651.27|7.5e-16,HEAT_EZ|PF13513.2|74,HEAT_EZ|PF13513.2|0.0013,HEAT_EZ|PF13513.2|0.068,HEAT_EZ|PF13513.2|0.017,HEAT_EZ|PF13513.2|2.5e+02,HEAT_EZ|PF13513.2|1.2e+04,HEAT|PF02985.18|1.1e+04,HEAT|PF02985.18|0.084,HEAT|PF02985.18|7.3,HEAT|PF02985.18|21,HEAT|PF02985.18|0.17,HEAT|PF02985.18|95,HEAT|PF02985.18|6.4e+03,HEAT|PF02985.18|3.8e+03,V-ATPase_H_N|PF03224.10|9.3e+02,V-ATPase_H_N|PF03224.10|4.2,V-ATPase_H_N|PF03224.10|0.92,V-ATPase_H_N|PF03224.10|0.02,Atx10homo_assoc|PF09759.5|0.016,Atx10homo_assoc|PF09759.5|27,Atx10homo_assoc|PF09759.5|6.1e+02,Atx10homo_assoc|PF09759.5|95 S_Transcript_10706:2-2083(+)
FIVSPPKKKKKNKNKRHNPDIIHRKRILYFSLTFPKLPLSLSPPISSSSLSLSSGLQPAMDRGERRSGSARRSLKRKLEEDFHENFHSNDNFEDLPLSERQHELHNHHQHQQHHNHQDLKAEITAQVEVLKGALSWSETDRTSAKRASHFLSELAKNEDLVNLIVDCGAVPALVMHLQAPRHESVSKPLEHEVEKASAFALGLLAVKPEHQQLIVDAGALPHLVALLKRSKNSCNSRSVHGVIRRAADAVTNLAHENSNIKSCVRLEGGIPPLVELLDSSDVKVQRAAAGALRTLAFKNDENKNQIVEFNALPTLILMLRSEDPAIHYEAVGVIGNLVHSSPNIKKEVFLAGALQPVIGLLSSTCPESKREAALLLGQFAAADSDCKVHIVQRGAVPPLIKMLESTDTQLMEMSAFALGRLAQDSHNQAGIVQSGGIMPLLELLDSRNGSLQHNAAFALYGLADNEDNVADLIKVGGVQKLQEGDFIVQPTKDCVAKTLKRLDEKIQGRVLNHLLYLMRVADKIVQSRIALALAHLCSPEHHRRIFIDNNGLQVLLELLESPDIKEQEDGSMALYKMACKATMLSPIDAAPPSPTPQVYLGVQYVNNSTLSDVTFLIEGRRFYAHRICLLASSDAFRAMFDGGYREKDANDIEIPNIRWNVFELMMRYIYIQARLMSIWTSHRTCLELLTSIC*

Click here to download the sequence:
Link to NCBI Protein BLAST