Transcript Information: S_Transcript_107380.p1


Annotated TAIR IDAT5G08330.1
Annotated Gene NameTCP family transcription factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2680828-2681547 | Forward length=239
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7588574565538
Replicate 26.1869198230068
Replicate 35.0741919383451
Condition 2: 8 Hour
Replicate 16.6571324270415
Replicate 26.6286958932523
Replicate 35.8646776479314
Condition 3: 24 Hour
Replicate 16.8193022536775
Replicate 26.3554603891344
Replicate 37.8735482534489


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107380.p1 GENE.S_Transcript_107380~~S_Transcript_107380.p1 ORF type:complete len:189 (-),score=22.91 S_Transcript_107380:396-962(-)
ATGATGTACCTGAGCAATCGGCATGAAATTCCCAACCCTAGCGGCTTCAGCCGCAGCCGCCGCCACCTACTCCACCGCTCCGCCGCGTCATCTGGTGGGTCCGCCCCCCACAAGCAGCAGCAGCAGTCGGCGGGGCCCACTCCTTTTCTTCTTGGGAAGCGGCTCCGGACGGCGGCGGCGGCGAGTGAGGAGGGGGAGAATCAGAACGGAGTCGTTGAAAAAGAGGATATAGTCACCACGACTTCCGTGGGGGGGCACACTGCTGGGTACTGGGCCATACCGGCCCGGCCCGATTTCTGGAGCTTTGCTACCCCCGAGATGGTTGTGGGCCCCAATGGTCTGGCCCCTATGGCTGGGAGGTTCTTGAGTCAGCAACCACAACAACAGCAGCAGCAGCAGTCGGCGGCTACGACTATGGCGGCGGCTGCGGCTGAAGCCACTAGGGTTGGGAATTTCATGCCGATTGCTCAGGTACATCATCTCAATCTACTCGCCTCGCTCTCCGGAGCTCCGGCCTCCGGTGGTGGTGGAGCTTCATCTGGACGGAGAGACGACGATCCTCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107380.p1 GENE.S_Transcript_107380~~S_Transcript_107380.p1 ORF type:complete len:189 (-),score=22.91 S_Transcript_107380:396-962(-)
MMYLSNRHEIPNPSGFSRSRRHLLHRSAASSGGSAPHKQQQQSAGPTPFLLGKRLRTAAAASEEGENQNGVVEKEDIVTTTSVGGHTAGYWAIPARPDFWSFATPEMVVGPNGLAPMAGRFLSQQPQQQQQQQSAATTMAAAAAEATRVGNFMPIAQVHHLNLLASLSGAPASGGGGASSGRRDDDPR*

Click here to download the sequence:
Link to NCBI Protein BLAST