Transcript Information: S_Transcript_107388.p1


Annotated TAIR IDAT4G39235.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:18268514-18269034 | Forward length=86
E-Value3.1E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4785000686211
Replicate 20.81714035398203
Replicate 30.68306429939261
Condition 2: 8 Hour
Replicate 11.5796585420098
Replicate 22.4857609599696
Replicate 30.78947583722153
Condition 3: 24 Hour
Replicate 11.6181395178218
Replicate 22.3083511790724
Replicate 31.6347621373686


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107388.p1 GENE.S_Transcript_107388~~S_Transcript_107388.p1 ORF type:5prime_partial len:108 (+),score=20.10 S_Transcript_107388:1-324(+)
GGTGGTAGTTTCTTGTTGGGCAAGACGAAGATGGTTCTAGAGCTCAATATAATGGCAACCTCCATGACCTCTCATTGTATTCACAACAATAACATCCTCTCCTTAATCTCTCTTGCTCCAGCTCGTCCTGGGCCTCGAAATAGTCAGAATTGGCACTGCTCATGTCGGAAGAAGAAGAATGAAGAAGCAACTTTTCTCGAGGATTTGAAGGACCACGTTGATGAGTTTATCCATGCTTCGATGGATGAACACAAGACATGCTTTAAGAAAACCATGCAGAAGATGTTCGGGATGTCTAAGAAGGTAGCAGAAAAAGAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107388.p1 GENE.S_Transcript_107388~~S_Transcript_107388.p1 ORF type:5prime_partial len:108 (+),score=20.10 S_Transcript_107388:1-324(+)
GGSFLLGKTKMVLELNIMATSMTSHCIHNNNILSLISLAPARPGPRNSQNWHCSCRKKKNEEATFLEDLKDHVDEFIHASMDEHKTCFKKTMQKMFGMSKKVAEKEF*

Click here to download the sequence:
Link to NCBI Protein BLAST