Transcript Information: S_Transcript_107509.p1


Annotated TAIR IDAT2G27800.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11849789-11851351 | Reverse length=442
E-Value2.5E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.776169094181
Replicate 23.8758954628067
Replicate 35.1091363474839
Condition 2: 8 Hour
Replicate 15.9557396381182
Replicate 27.3061217404513
Replicate 35.3769705670223
Condition 3: 24 Hour
Replicate 14.0836156074759
Replicate 24.6961051014053
Replicate 33.1243523474806


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107509.p1 GENE.S_Transcript_107509~~S_Transcript_107509.p1 ORF type:complete len:444 (+),score=53.61,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|1.7e-11,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|8.2e-06,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|6.5e+03,PPR_1|PF12854.3|7.3e-07,PPR_1|PF12854.3|4e-11,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|6.6e-07,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.076,PPR|PF01535.16|3.4e+02,PPR|PF01535.16|5.7e+03,PPR|PF01535.16|0.0019,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0003,PPR|PF01535.16|1.5e-05,PPR_3|PF13812.2|6.6e+03,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|0.71,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.013 S_Transcript_107509:155-1486(+)
ATGTATTTTTCTGTCAACCCTTTTATTTCCTCTTTTTGGAGGTCCTACACTCACCATGCTAGAAACCCATTTATTATACTTTCTTGTTTACATAATTTTACTCCTAATTCTAATTGTACCCCAGTTATTATAAACCCTAAACACAAATTCTTTCATATTACCATGCATACGCATGATCCCATTTCCCACCATTATTATTATTGTCAAGCTAACCATTATGGTTTATCATGGTATTCTACCAAGTCTCTTAGACCTTGGTTTCATAGAGCCTACAAGAAACGTGTTAATAAAAGACTTAGATTAGTTAATAAGCCTGTTCTTGATGAAACCCGGTTTAAAGAGGCTGTTTCCCAGCTTCCTGCACGATTTACTGCTCCTGATTTGCATAATGTCATTGCCCTTGAAGATGACCCTTTGGTGTGTTTAGAGCTTTTTAATTGGGCATCCAAGCAACATAGATTTGACCATAGTGTAAATACTTTTCATATTACTATTCAGAAACTTGGGCTTGCTGGAATGTTGGATGAAATGTATGATGTTGTTGATCAACTGCTTGGTAGGCCTCATTTTGGGTCTGAACCTTTGTATAATACTATCATTTATTATTTTACTCGAGCCCGAAAACTTAGCAGAGCTGTAACTGTTTTCAAGCACATGCAGAAGGTTGATAACGTGGATTCTAGGCCTTCCATTAAGACTTACAATCTTTTGTTTGCGGCTTTTGTTAGTCGTGGGAAGGATACCTATGTCAATCATATGTACATGGGTACCATGTTGTGTCTTTTTAGGCAACTGTTGAATGATGGAATTCAGCCCGATGTGTTCTGTCTCAATTCGATGATACACGGTTATGTGCTTTCTAATCATGTCAATGATGCTCTTAGGATGTTTCATCAAATGGGCGTTGTTTATAGTTGTGTGCCTGATGCGATCACTTACGATCATCTAATTCATGGGCTCTGTGCTCAAGGCCGAACAAATAATGCTAGGGAGTTGTTTAATGAAATGAAGGGGAAAGGGTTTGTTTGTAGTGCTAAAACCTATAACTCTCTTGTGAATGCGTTGGTGCTTGTTGGAGAGCTTGAGGAAGCTGTGAGATATTTGTGGGAGATGACTGACAAGCAGAGACCAGCAGATTTCATTACTTACAACACACTTTTGGATGAGTTTTGCCGAAAAGGAAGAGCCTCTGATGCATTGAGTTTGATAGAAGAGTTTAAGGAGAAACATCTTGTTGATGGTCCTAGTTACAGAAAGCTATCACATGTAATCAAAGATGGCTTTGCAAATGACAGCAAGGACTTCCGTAGAGATAAGGGTTGTTCACTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107509.p1 GENE.S_Transcript_107509~~S_Transcript_107509.p1 ORF type:complete len:444 (+),score=53.61,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|1.7e-11,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|1.3e-08,PPR_2|PF13041.2|8.2e-06,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.41,PPR_1|PF12854.3|6.5e+03,PPR_1|PF12854.3|7.3e-07,PPR_1|PF12854.3|4e-11,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|6.6e-07,PPR|PF01535.16|1.4e+02,PPR|PF01535.16|0.076,PPR|PF01535.16|3.4e+02,PPR|PF01535.16|5.7e+03,PPR|PF01535.16|0.0019,PPR|PF01535.16|1.7e-06,PPR|PF01535.16|0.0003,PPR|PF01535.16|1.5e-05,PPR_3|PF13812.2|6.6e+03,PPR_3|PF13812.2|0.054,PPR_3|PF13812.2|1.4e+02,PPR_3|PF13812.2|0.71,PPR_3|PF13812.2|0.0013,PPR_3|PF13812.2|1.4,PPR_3|PF13812.2|0.013 S_Transcript_107509:155-1486(+)
MYFSVNPFISSFWRSYTHHARNPFIILSCLHNFTPNSNCTPVIINPKHKFFHITMHTHDPISHHYYYCQANHYGLSWYSTKSLRPWFHRAYKKRVNKRLRLVNKPVLDETRFKEAVSQLPARFTAPDLHNVIALEDDPLVCLELFNWASKQHRFDHSVNTFHITIQKLGLAGMLDEMYDVVDQLLGRPHFGSEPLYNTIIYYFTRARKLSRAVTVFKHMQKVDNVDSRPSIKTYNLLFAAFVSRGKDTYVNHMYMGTMLCLFRQLLNDGIQPDVFCLNSMIHGYVLSNHVNDALRMFHQMGVVYSCVPDAITYDHLIHGLCAQGRTNNARELFNEMKGKGFVCSAKTYNSLVNALVLVGELEEAVRYLWEMTDKQRPADFITYNTLLDEFCRKGRASDALSLIEEFKEKHLVDGPSYRKLSHVIKDGFANDSKDFRRDKGCSL*

Click here to download the sequence:
Link to NCBI Protein BLAST