Transcript Information: S_Transcript_107520.p1


Annotated TAIR IDAT5G51080.1
Annotated Gene NameRNase H family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20769022-20770675 | Reverse length=322
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.34119232352795
Replicate 20.56571255275679
Replicate 30.47289066881027
Condition 2: 8 Hour
Replicate 10.47845426993568
Replicate 21.2189789322928
Replicate 30.47824017062458
Condition 3: 24 Hour
Replicate 10.9802191309882
Replicate 21.162246747505
Replicate 31.455117946449


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107520.p1 GENE.S_Transcript_107520~~S_Transcript_107520.p1 ORF type:complete len:312 (+),score=39.62,RVT_3|PF13456.2|6.1e-16 S_Transcript_107520:3907-4842(+)
ATGCAAGTTTGGGCTGCTGAAATGTTAGGATCCGGGTGTCCCGAGTATCATCCACAACGAGCCATCAAGGCTCAGGCACTCGCAGATTTCATCGTCGAGTATACTTGGGATAATGAATATTTGGCAGACCCTAAAACCGACTGGTGGAAGGTCTTTGTTGACGGGTCGGTCACCCTAAAGGGAAATGGAGCCGGGCTTGTCATAATCGATCCTTATGAGTACAGGTCCGAATATGCAATGTGGATCACATTCAAGGCCTCCAACAATGAAATCGAGTATGAAGCACTACTTAGTGGACTCAATCAAGTCAAAGCTGCCAAGGCTCGGAAAGTAGAGATCTTCACAGATTCCTTACTGGTGGTCGGGAAAATATTAGGAGAATACCTAGCAAAAGACCTCCATATGACTCTCTACTTACATAAGGACAAATGTGTGTTGTCCGAGCTTGAAGACTACAAGGTCACCCATATCCCAAGATCTGTAAACCAGGAGGCTGACGTCCTGGCAAAGTTGGCCAGCTCGGCCCTCGGTGACAAGCCAAGGACGGTGTACTGGGAAGTGCTGTCTAGAAAGAGCATTAAGGTCGGCCAAACTCTGTGGTTTGACAGGTTGGCAACTTGGATGGATCCCATCAGAGGATATCTTGAGAAGGGTACCTTGCCTGACGATCCCAAAGAAGCTGAGAAATTGAAGACCAAATCCAAGTGGTTTGCCATGCATGACGGACACCTATACAAGAAGTCCTTCACCCATCCTTGGTTGAAATGCCTAAGTACAGACCGGGGAAAGGTCTTACTAGAAGAGCTACACCAGGGGCTATGTTCTGCTCACATGGGAGGAAGGACCCTGGCTCTAAAGGAACTAAGGACGGGATACTACTGGCCAACCCTGCAAGCAGATGCAATGGAGCTAGTAAAATCATGTCCAAAGTGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107520.p1 GENE.S_Transcript_107520~~S_Transcript_107520.p1 ORF type:complete len:312 (+),score=39.62,RVT_3|PF13456.2|6.1e-16 S_Transcript_107520:3907-4842(+)
MQVWAAEMLGSGCPEYHPQRAIKAQALADFIVEYTWDNEYLADPKTDWWKVFVDGSVTLKGNGAGLVIIDPYEYRSEYAMWITFKASNNEIEYEALLSGLNQVKAAKARKVEIFTDSLLVVGKILGEYLAKDLHMTLYLHKDKCVLSELEDYKVTHIPRSVNQEADVLAKLASSALGDKPRTVYWEVLSRKSIKVGQTLWFDRLATWMDPIRGYLEKGTLPDDPKEAEKLKTKSKWFAMHDGHLYKKSFTHPWLKCLSTDRGKVLLEELHQGLCSAHMGGRTLALKELRTGYYWPTLQADAMELVKSCPKC*

Click here to download the sequence:
Link to NCBI Protein BLAST