Transcript Information: S_Transcript_10754.p1


Annotated TAIR IDAT2G30800.1
Annotated Gene Namehelicase in vascular tissue and tapetum
Annotated Gene Symbol(s)HVT1, ATVT-1
Annotation TypeOrtholog
Chromosome Positionchr2:13120585-13126635 | Reverse length=1299
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.203883816582
Replicate 216.813980751493
Replicate 318.011414030033
Condition 2: 8 Hour
Replicate 119.708788147931
Replicate 218.023771605715
Replicate 318.393513659137
Condition 3: 24 Hour
Replicate 120.2065172288
Replicate 216.522649729853
Replicate 318.408024344056


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_10754.p1 GENE.S_Transcript_10754~~S_Transcript_10754.p1 ORF type:complete len:1240 (+),score=254.19,HA2|PF04408.19|1.5e-16,Helicase_C|PF00271.27|4.6e-12,R3H|PF01424.18|4.5e-11,OB_NTP_bind|PF07717.12|2.2e-10,DEAD|PF00270.25|1.1e-09 S_Transcript_10754:273-3992(+)
ATGAAACCCTCTTCAAAGGGTGGTGGTAAGAAGAAACAGAAGAAAGGGTTTCGTCCAGAGCACACTTCTGGTGTTGCTGAATCCACTCGCATTCGTGTTTCCCAAATCCTTGACCAGTTCCGTTCTTCTAATGATCAAGTTTATACTTTTGAAGATAACCTGACCAACCATGAGAGGGCAGTGGTTCATGAAATGTGCAGAAAAATGGGTATGACATCAAAAAGTTATGGGAAAGGGAATCAACGACGTGTCTCAGTTTACAAGAGCAAGAAAAAATCAGAACCTTTGGAAGGAAAGGAAAATGTGAGTTTACTTGCGTTCTCAGAAGAATCGAGAAGGGTCCTTGTGGATTTATTTATGCATTATCCTCCTGGTGAAGATGAGGTGGGGAATCAGCATATAAATGAAGACGTTGGGGAAACTCATAAACCGCGGGGCAAAAAAGATGATATTTTTTGGAAGCCTCGAATGAACAAGGCTGAAATAGCAAAGAAGGTGGACTCGCTTGCTTCTAAAGTAGAGAATACACCAAAACTGAAGGAGATTGCTGAGAAGAGGTTTAAACTTCCTATTGCTTCTTTCCAGGATACTATCACGTCAACAGTCGCAGCTCACCAGATAGTGCTTATATCTGGTGAGACTGGATGTGGGAAGACTACACAGGTTCCACAATATCTACTAGATTACATGTGGGCTAAGGGTGAGGCTTGTAAAATAGTTTGTACACAGCCACGACGTATTTCTGCAATGTCAGTTGCTGAAAGAATTTCTCATGAGAGAGGGGAAAAAATTGGAGAAAGTGTGGGGTACAAGATACGATTGGACACTAAAGGTGGGAGACAATCCTCCATATTGTTTTGCACAAACGGAATCCTGCTGAGGGTGCTTGTTTCAAGGGGAGTATCCCAATCAGGGGCATCAAGTATACAGACAGAGAAGGATATTTCCGAGATCACACACATTATTGTGGATGAGATTCATGAAAGGGATCGATACTCTGATTTTATGCTTGCTATTCTCAGAGAGTTGCTTCCAGCATATCCTCAACTGCGTTTGGTTCTGATGAGTGCTACACTTGATGCTGAAAGATTTTCTCGGTATTTTGGTGGCTGCCCTATCATCCGAGTTCCTGGATTCACACATCCTGTGAAAACTTTTTACCTAGAGGAAGTTTTGGCCATCCTGAAAAAACCGGACAAAAATCATCTTAATGCTTCTTCATCCAGTTGCTCAAGTGAGGAGCTCAGCTTAAGTGAAGATTATAAGGTAGCCCTAGATGAGGCAATTGAGATGGCTTGTTCAAATGAAGAGTTTGATCCTCTCCTAGAATTAATTTCTTCTGTCGGAACGCCTACAGCCGTCAATTATCAGCACTCTGCAACTGGAGTGACCCCTTTGATGGCTTTTGCTGGAAATGGGAAGGTAGAAGATATTTGTACGCTTCTTTCGTTAGGTGCAGACTGCCATCTGCAGGACCAGAATGGAAGCACTGCTTTGGAATGGGCAATGCACGGAGATCAACTGGAAACAGCTGAAATTATTAAGAAACACATGGAAAGCATCTCTAGCTCAACGGAGGACGAACAATTGCTTAAGAAATATATGTCAAGCATCAATCCTGAGTTTATTGACTATGTTCTAATAGAGAAGTTGCTTAGGAAGATATGTACCGAGTCAACTGATGGAGCTATCCTTGTTTTCCTTCCCGGATGGGAGGATATAAATAGGACCCGAGAAAGATTACTGGCTAATCCCTTTTTCAAGGATTCGTCGAAGTTTCTAATATTACCTCTCCATTCAATGGTCCCATCTACGGAGCAAAAGAAGGTCTTCAAGCGGCCATCTTCAGGTTGCCGGAAGATTATTCTCTCAACAAATATTGCTGAGACTGCAATAACCATTGATGATGTAGTGTATGTTCTTGATAGTGGTCGGATGAAGGAGAAAAGTTATGACCCATACAATAATGTGTCAACGCTACAATCTTCATGGATTTCACAGGCTAATGCAAAGCAGAGAGAAGGACGTGCAGGCCGCTGCCAGCCAGGAGTCTGTTATCATCTCTATTCGAAAATAAGAGCTGCATCTCTTCTTGCATTCCAAGTGCCTGAAATAAAGAGAATGCCGATTGAGGAGTTATGTTTGCAGGTGAAGCTGATCGATCCGAATTGCAAGATAGAAGAATTCTTGAAGAAAACACTAGATCCTCCAGTATTCGAAACCATAAAGAATGCTATTGCTGTTCTCCAAGACATTGGTGCTTTGTCACTTGATGAGCAACTGACAGACTTAGGGGAGAAACTAGGTTCCTTGCCGGTTCATCCGTTAACCAGCAAGATGCTATTCTTCGCTATATTACTGAACTGTCTAGATCCGGCTTTAACTCTTGCATGTGCAGCTGACTATAGAGATCCCTTCACTGTACCAATGTTACCAAATGAGAAGAAAAAGGCTGCCGCAGCAAAAGCTGAGCTTGCATCATTGTATGGGGGGCATAGCGATCAGTTGGTGGTTATTGCAGCATTTGACTGCTGGAAAAGTGCAAGGGAGAAGGGTCAAGAAGCATGGTTTTGTTCCAAGTATTTTATCTCCTCAACCACCATGCTTATGCTGTTTGGTATGCGTAAACAGCTTCAGAATGAGTTGATTCGGGGTGGATTTATTCCAGATGATGTATCAGCCTGTAGTATGAATGCAAGGGATCCAGGTATAGTTCGTGCGGTTCTTGTGGCCGGTTTGTATCCAATGGTGGGAAGATTGCATTTGCCTAACAAGAATGGTAACCGGTTCCTCGTGGAGACTTCAAGTAGCAGTAAAGTTCGTTTGCATTCTCAGTCATTAATCTCCAAATTATCATTTAAGAAATGCAAGGAGCGCCCTTTACTAGTATATGATGAGGTGACTAGGGGGGATGGAGGCTTACACACGAGGAACTGCACCATCATTGCTCCCCTTCCGTTACTATTACTTGCAACAGAAATTGTTGTTGCTCCAGGAAAGTGCAACAATGATGATGATATGGATGGTGAGGATGACGATAGTGGAAGTGACGTTGATGGTGATGAGGAAGGTAGCGATGAAGGCGAAATGGATAATCTTGGCAAGACAAGCAAACAGGGAGAAAGTATCATGTCATCACCTGATAATGCTGTTACAGTTGTTATAGATCGCTGGCTCTCTTACGAGTCAACAGCACTCGAAGTTGCTCAGATTTACTGCTTGAGAGAACGATTATCCGGTGCTATTCTTTTTAAAGTAACAAATCCACGACAGGTTCTTCCCCCAGTACTAGGAGCATCTGTTTATGCAATTGCCTGTCTTCTGGCTTATGATGGGTTAACGGGAATTTCCTCCCCTGTGGAATCTGTAGACGCTTTGACTTCAATGGTGAATGCTGCTGAAATTGGGAGGTCAACTGGGAAGAAGGCAAATCAGGCTCCAAATAACTTCCTCATATCACTAGTTAGGCATGATTCTGGCCGCCATAATAATTCACCATATCCTAAAAAATACAGAAGACCACAAAATTTACCACCTCCAGAACCAAGGCTGATGCTTGTGCAGCCGTCTATGCAGCGTCCTCCAGCACCAGCAGCACAATCAAGGCCGTCTCCAAGACCCAGGGTTGTAGATCTAGCCGGGTTTGGCTCGGACAGGTATGGACCGTACGGGCCAAGAGGCGACTCATCAAAGCGAACACGTGGCAATAGGTCAGGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_10754.p1 GENE.S_Transcript_10754~~S_Transcript_10754.p1 ORF type:complete len:1240 (+),score=254.19,HA2|PF04408.19|1.5e-16,Helicase_C|PF00271.27|4.6e-12,R3H|PF01424.18|4.5e-11,OB_NTP_bind|PF07717.12|2.2e-10,DEAD|PF00270.25|1.1e-09 S_Transcript_10754:273-3992(+)
MKPSSKGGGKKKQKKGFRPEHTSGVAESTRIRVSQILDQFRSSNDQVYTFEDNLTNHERAVVHEMCRKMGMTSKSYGKGNQRRVSVYKSKKKSEPLEGKENVSLLAFSEESRRVLVDLFMHYPPGEDEVGNQHINEDVGETHKPRGKKDDIFWKPRMNKAEIAKKVDSLASKVENTPKLKEIAEKRFKLPIASFQDTITSTVAAHQIVLISGETGCGKTTQVPQYLLDYMWAKGEACKIVCTQPRRISAMSVAERISHERGEKIGESVGYKIRLDTKGGRQSSILFCTNGILLRVLVSRGVSQSGASSIQTEKDISEITHIIVDEIHERDRYSDFMLAILRELLPAYPQLRLVLMSATLDAERFSRYFGGCPIIRVPGFTHPVKTFYLEEVLAILKKPDKNHLNASSSSCSSEELSLSEDYKVALDEAIEMACSNEEFDPLLELISSVGTPTAVNYQHSATGVTPLMAFAGNGKVEDICTLLSLGADCHLQDQNGSTALEWAMHGDQLETAEIIKKHMESISSSTEDEQLLKKYMSSINPEFIDYVLIEKLLRKICTESTDGAILVFLPGWEDINRTRERLLANPFFKDSSKFLILPLHSMVPSTEQKKVFKRPSSGCRKIILSTNIAETAITIDDVVYVLDSGRMKEKSYDPYNNVSTLQSSWISQANAKQREGRAGRCQPGVCYHLYSKIRAASLLAFQVPEIKRMPIEELCLQVKLIDPNCKIEEFLKKTLDPPVFETIKNAIAVLQDIGALSLDEQLTDLGEKLGSLPVHPLTSKMLFFAILLNCLDPALTLACAADYRDPFTVPMLPNEKKKAAAAKAELASLYGGHSDQLVVIAAFDCWKSAREKGQEAWFCSKYFISSTTMLMLFGMRKQLQNELIRGGFIPDDVSACSMNARDPGIVRAVLVAGLYPMVGRLHLPNKNGNRFLVETSSSSKVRLHSQSLISKLSFKKCKERPLLVYDEVTRGDGGLHTRNCTIIAPLPLLLLATEIVVAPGKCNNDDDMDGEDDDSGSDVDGDEEGSDEGEMDNLGKTSKQGESIMSSPDNAVTVVIDRWLSYESTALEVAQIYCLRERLSGAILFKVTNPRQVLPPVLGASVYAIACLLAYDGLTGISSPVESVDALTSMVNAAEIGRSTGKKANQAPNNFLISLVRHDSGRHNNSPYPKKYRRPQNLPPPEPRLMLVQPSMQRPPAPAAQSRPSPRPRVVDLAGFGSDRYGPYGPRGDSSKRTRGNRSG*

Click here to download the sequence:
Link to NCBI Protein BLAST