Transcript Information: S_Transcript_107540.p1


Annotated TAIR IDAT5G63860.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)UVR8
Annotation TypeOrtholog
Chromosome Positionchr5:25554821-25558587 | Reverse length=440
E-Value1.8E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7410374639838
Replicate 23.0929144239507
Replicate 32.0683442336748
Condition 2: 8 Hour
Replicate 12.3916325589308
Replicate 21.6726615805403
Replicate 32.5897758772407
Condition 3: 24 Hour
Replicate 12.2457356859489
Replicate 21.6944905851475
Replicate 33.7715206587089


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107540.p1 GENE.S_Transcript_107540~~S_Transcript_107540.p1 ORF type:complete len:107 (-),score=21.96,RCC1|PF00415.14|1.3,RCC1|PF00415.14|4.8e-15,RCC1|PF00415.14|1.3e+02,RCC1_2|PF13540.2|7.6e-07,RCC1_2|PF13540.2|0.046 S_Transcript_107540:44-364(-)
ATGGAGATTGAGGAACAATCTAAGAATTCCGAACAGGGTGTTCGTCATATCCTTCTTATCTCTGCTGGTGCTAGCCACTCTGTTGCGCTTCTCTCTGGAAATGTGGTTTGCTCTTGGGGAAGAGGGGAGGATGGGCAATTAGGCCATGGAGACGCCGAAGATCGTTTTTCTCCTGTACAACTGAGTGCCCTGGATGGACATGAAGTTAATTCCATTACTTGTGGAGCTGATCATACCCTTGCATATTCTGAGCCGCGTTTGCAAGTCTACAGTTGGGGATGGTATGTTCTTTGTAAATATCATTTGGCTCTTGAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107540.p1 GENE.S_Transcript_107540~~S_Transcript_107540.p1 ORF type:complete len:107 (-),score=21.96,RCC1|PF00415.14|1.3,RCC1|PF00415.14|4.8e-15,RCC1|PF00415.14|1.3e+02,RCC1_2|PF13540.2|7.6e-07,RCC1_2|PF13540.2|0.046 S_Transcript_107540:44-364(-)
MEIEEQSKNSEQGVRHILLISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRFSPVQLSALDGHEVNSITCGADHTLAYSEPRLQVYSWGWYVLCKYHLALEV*

Click here to download the sequence:
Link to NCBI Protein BLAST