Transcript Information: S_Transcript_107594.p1


Annotated TAIR IDAT3G15200.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5117489-5119060 | Reverse length=523
E-Value1.6E-168
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.6758288998868
Replicate 23.2098717772443
Replicate 34.0757427809062
Condition 2: 8 Hour
Replicate 15.9302650789817
Replicate 25.6444627323067
Replicate 34.9069630766532
Condition 3: 24 Hour
Replicate 13.3793189930201
Replicate 22.8381937149017
Replicate 32.7869662326095


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107594.p1 GENE.S_Transcript_107594~~S_Transcript_107594.p1 ORF type:complete len:543 (+),score=92.67,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|0.00041,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|8.8e-18,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|1.3e-07,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|0.97,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|2.3e-08,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|8.7e-10,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|7.4e-05,PPR|PF01535.16|0.0012,PPR|PF01535.16|18,PPR|PF01535.16|7.7e+02,PPR|PF01535.16|0.011,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|67,PPR|PF01535.16|5.5,PPR|PF01535.16|1.1e-06,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|7.8e+02,PPR_3|PF13812.2|53,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|9.9e-07,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.0023 S_Transcript_107594:314-1942(+)
ATGCACCCTCATTGTCAACACTTCACAACCCTTTTCAGGGTGGTTATCCAACGGAATTTCAAATTCAAATTAAGGGCAGTAACCCATCATCAATGTCACAGCTTTCATCACTTATTTCCTCCATATTCTCTCTCCAACCCAGTAAAGTTTCGTGCTTTCCATCTCAAAGGAAATCCAGCTTTCATCAATCAAGATCCTAGATTTTCTCAATTGCCCAAAAGTTCTGCAGAAAATGAAACTACCCACATTGAGAAGATTGCATCAAGGGTTCAGAATTTGCTCAAAGAACTCTCAAATAGCTCAGACGAGGAACTTGGCCAAGTTCTTGATATTGATTGTGGTGTATCACTTTGTGAAGACTTGGTTCTTAATATAATCAGACGACATAGTTCAGATTGGAAACCAGCGTTTAGCTTCTTCAGATGGGTCTGTACAGGTGCAAATAGAAATGGGTATTTGCCAAAATCAGAGGCTTACAATGAAATGCTAGGGATACTGGGTAAAATGAAGCGGTTCGAGGAGGTCGACCAAGTGTTCGATGAAATGTCTCAAAGAGGAGTTGTTAATGAGAGGTCTTATGGGATTGTGGTTCATAGGTATGCTGCTGCTCATAGAATTGATGATGCCATTGAGTTTTTCTATAAAAGGAAGGAGTATGGACTTGAGCTTGATTTGGTTGCTTTTCAAACTCTTTTGTTGTCCTTGTGCCGGTACAAACATGTTGAGGCTGGTGAATTATTGTTCCATGCGAAGAAAGGCGAGTTTGAGTATGATATTAAGACTTGGAATATCATCCTTAATGGGTGGTGTGTGCTAGGGAATTTACGCGAAACCAAGAGGTTTTGGAGGGAGATAATCCGTTCCAAATGCAGACCAGATCGGTTCACATGTGGAACTTTCATAAATGCATTATGCAAGTCTGGCAAAATTAGCACTGCGGTCAAGTTGTTTCATGCTATGTGGGAAAAGGATTGCACCCCAGATGTTGTAATTTGCAACAGTGTGATTGATGGGCTGTGTTTCAAGAAGAGGATACCTGAAGCCCTTGAAATATTTCAAAAGATGCATAGTAAGGATTGCGAGCCAAATGTGGTGACGTATAATTGCCTGATCAAGCACTTGTGTAAGATTCAAAGGATGGAAGTGGTTTTTGAACTTCTGGGTGAGATGGAGGAGAAGGGAAAAAACTGTGTACCAAATGCTACGACTTATAGTCACTTGTTGAATTCATCAAGAAGACCAGAGGAAGTTTCGATTCTGCTGGAAAGAATGAAGAATGTTGGATGTGAGATGACTGGAGACACATATAATTTGCTGCTGAGGTTGTATATGAAATGGTATTGTGAGGAACAAGTTCAATCAACTTGGACCAAGATGTTGAGAGAAGGTATGGGACCTGACCAACGTTCTTACACAATCATGGTTCATGGTTTGCATGACCAAGGGAGAATGGAAGATGCACTGAAGTATTTTCATGAAATGAAGTCAAAGGGCATTGTGCCAGAACCCAGGACAATATTGTTGGTTGATGTCATGAACGATAAGCTGAAGGAACGAGGACCAGAAAATACAATCAACACGAAGTTCTCCAGGCATGCCCGTAGGAGAGGCAGGAAGAGCATCTCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107594.p1 GENE.S_Transcript_107594~~S_Transcript_107594.p1 ORF type:complete len:543 (+),score=92.67,PPR_2|PF13041.2|1.4e-05,PPR_2|PF13041.2|0.00041,PPR_2|PF13041.2|1.2e-08,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|8.8e-18,PPR_2|PF13041.2|1.5e-13,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|0.00021,PPR_2|PF13041.2|1.3e-07,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|0.97,PPR_1|PF12854.3|5.5,PPR_1|PF12854.3|0.14,PPR_1|PF12854.3|2.3e-08,PPR_1|PF12854.3|2.2e-08,PPR_1|PF12854.3|8.7e-10,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|1e+03,PPR_1|PF12854.3|7.4e-05,PPR|PF01535.16|0.0012,PPR|PF01535.16|18,PPR|PF01535.16|7.7e+02,PPR|PF01535.16|0.011,PPR|PF01535.16|3.8e-05,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|67,PPR|PF01535.16|5.5,PPR|PF01535.16|1.1e-06,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|7.8e+02,PPR_3|PF13812.2|53,PPR_3|PF13812.2|2.7,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|9.9e-07,PPR_3|PF13812.2|1e+02,PPR_3|PF13812.2|4.1e+02,PPR_3|PF13812.2|0.0023 S_Transcript_107594:314-1942(+)
MHPHCQHFTTLFRVVIQRNFKFKLRAVTHHQCHSFHHLFPPYSLSNPVKFRAFHLKGNPAFINQDPRFSQLPKSSAENETTHIEKIASRVQNLLKELSNSSDEELGQVLDIDCGVSLCEDLVLNIIRRHSSDWKPAFSFFRWVCTGANRNGYLPKSEAYNEMLGILGKMKRFEEVDQVFDEMSQRGVVNERSYGIVVHRYAAAHRIDDAIEFFYKRKEYGLELDLVAFQTLLLSLCRYKHVEAGELLFHAKKGEFEYDIKTWNIILNGWCVLGNLRETKRFWREIIRSKCRPDRFTCGTFINALCKSGKISTAVKLFHAMWEKDCTPDVVICNSVIDGLCFKKRIPEALEIFQKMHSKDCEPNVVTYNCLIKHLCKIQRMEVVFELLGEMEEKGKNCVPNATTYSHLLNSSRRPEEVSILLERMKNVGCEMTGDTYNLLLRLYMKWYCEEQVQSTWTKMLREGMGPDQRSYTIMVHGLHDQGRMEDALKYFHEMKSKGIVPEPRTILLVDVMNDKLKERGPENTINTKFSRHARRRGRKSIS*

Click here to download the sequence:
Link to NCBI Protein BLAST