Transcript Information: S_Transcript_107638.p1


Annotated TAIR IDAT1G18485.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6363172-6366084 | Forward length=970
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1724898967494
Replicate 22.4539225120093
Replicate 32.1830177405078
Condition 2: 8 Hour
Replicate 16.245292878589
Replicate 26.346299920249
Replicate 37.5910518511617
Condition 3: 24 Hour
Replicate 12.0284534669837
Replicate 22.0582441125458
Replicate 32.3677837604803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107638.p1 GENE.S_Transcript_107638~~S_Transcript_107638.p1 ORF type:complete len:980 (+),score=156.68,PPR|PF01535.16|4.2e+02,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|0.0007,PPR|PF01535.16|0.083,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.062,PPR|PF01535.16|0.00011,PPR|PF01535.16|20,PPR|PF01535.16|6e-05,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|9.3e-09,PPR|PF01535.16|2e+03,PPR|PF01535.16|15,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|2,PPR|PF01535.16|0.12,PPR|PF01535.16|2.1,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|18,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|41,PPR_2|PF13041.2|3.5e-06,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|4.3,PPR_2|PF13041.2|1.1e+02,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|44,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|9.4e+02,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|9.9,DYW_deaminase|PF14432.2|1.8e-37,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|17,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|4.2e+02,PPR_1|PF12854.3|0.043,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|0.0049,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.94,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|6.2e+03 S_Transcript_107638:128-3067(+)
ATGACATTGTTTTTATCACCACCATCTTCATCTCATCAACACAATCACCCATTTCACTTCTACTCAAATACCCAGATTATACCATACAAGAAGAAAAAAACCCTTAATAGTTCAATCAAAAGCTCACTTACATCTTTTTCTTTTTCTTCTCCAAAACCCCATCAAACTAACCCTTCATTGCCTCTGTCCAAGCTTGTAAGCAATCTATGCCACTCCCACAACCTCACTGAAGCCCTATCTCTAATTCAAGAACATTCAACTAATTTTAGCGGTAATGCAATCCAAACAGTTGAGGCTATTGGTTTGTTGATTCAATCATGTGGGCAGCTCAAAAACATAGAAATTGGCAGGAAAGTTCATGAAATTGTCTCCACCCATTTTGGTAATGATATTTTTCTGAACACCTGTCTTGTTACAATGTATTCTTCATGTGGGTCTCCTTTGAATTCTCTTATAGTGTTTGATCAGTTAAAGTTGAAGAATATATTTATATGGAATGCCATGATTAGTTCTTACACAAAAAATGAGTTTTATGAGGATGCAATATTGATGTTTCTTGAGTTGATTTATGAGACTGGTTTGGAGCCTGATAATTTTACTTTGCCTTGTGTTATTAAGTCCTGTGCTTTGCTTCAAAGGGCTCGTTTCGGAAAGGCAATTCATGGGTTGGCTGTTAAAATGGGTTTGGTTTCGGATGTTTTCGTGAGCAATGCTTTGGTTGCAATGTATGGGAAATTTGGGTTAGTTGGGGATTCTGTTGGAGTGTTTGAGAATATGGTTGAGAGAAACTTGGTTTCGTGGAACTCATTGATTCGTGTTTATTCGGAGAATGGATTTTATATGGAGAGTTTTGATGTGCTTGTGAGAATGTTGGAAGATGTGGAAGGTTTGGGTCCAGATGTTGCGACATTAGTGACAATATTACCAGTTTGTGCAGGGAAAGGGGATGTTGAAATGGGAAAAATGGTTCATTGTTTGGCCGTAAAACTAGGACTATTAAGTCATGAGGTAACTATGAGTAATGCCCTAATTGACATGTATGCCAAATGTGGCTTTTCATATGAAGCTCAAATGCTGTTTGAGAAACATGAAAATAAAAATGTGGTTTCATGGAATTCCTTGATGTGGAATTTTGCGAGGGAGGGTGATGCCGAAAAGGTGTTTGATCTTTTGAGGGAAATGCAAATGGTGGGAGGTGAAATCAAGATCAATGAGGTCACCATTTTGAATGTATTACCTGTATTCTCAAACGAGTCACGGTTGATGAGGTTAAAAGAACTTCATTGCTACTCATACAAACATGGATTTCTTCAACAAGAATTGGTGTGTAATGCGTTTATAGCTGCCTATTCGAAATGTGAGTCATTAAGTTCAGCTAGTTCTCTCTTTAGTGGGACTGAGATCAAAACAGTGAACTCTTGGAATGCACTAATTGATGGCCAGGCACAATATGGAGATCCGAGAAAGGCTATTGATTTGTACCTCGAAATGACATCTTTAGGCTTGCTTCCAGACAGTTTTAGCTTAAGAAGTATAGTTTTGGCCTGTTCTGAACTTGGATTGTCACTGTCTGGGAAAGAAATCCATGGATTTGTGGTGAGAAATGGGCTAGAAAAAGATCCATTTCTAACTGTTTCACTGCTTTCATTTTACTTCCGGTGTGACAAATCACATTATGCTCGCGTTTTGTTTGATAGGATAGAGAATAGAAATTTAGTTTCCTGGAATGCAATGATTACTGGGTGCACACAGAATGGACTTCCAGAGGAAGCTCTGGATGTCTTCCGTTACATGCTTGTAGAAGGGATTCAGCCCAATGAGATTACAGTAACAAGTCTGCTTGGAGCTTGTTCACAGCTTTCAAGCTTGCAGTTGGGGAAAGAAATCCACTGCTTCACCTTGAAGGCTCATCTAACAAAAGACATGATTGTTACTTCTTCTGTCTTAGACATGTATGCCAAATGTGGCTGCATACAACTGTCTCGTAGATTCTTTGACAGCCTTACTGTGAGGGGCCTTCCATCATGGACTGCCATGATTTCGGGATATGGAATTCATGGAAGCGGAAATGAGGCCTTGGTATTGTTTGAGCAAATGCAAAGGTCAGGGTTGAATCCTGATCACTTTACAGTTATTGGTGTACTGATGGCCTGCAGCCATGCTGGTCTCGTTAAAGAGGGTATGAGACATTTCAATGATATGCGCAATTTATATGGGATAGAGCCTAAATTGGAGCATTACACTTGTGTGGTGGATATGTTAGCTCGTGCTGGACATTTGGATTATGCGTTGAAGCTTGTCAAGAACATGCCTATGGAAGCTGACTCAAAGATATGGAGTTCTTTGGTTAGTTTTTGTAGAATCCATGGAAATAAGAGGTTGGGAAGTATAGCAGCTAAAAAACTAATTGAACTAGAACCAAGCAGGGTAGAGAATTTTGTAATAGTATCTAATTTATTAGCTCGTTCAGGTAAGTGGGACGATGTGAGAAGAATGAGGGTGCAAATGAGAGAGAAAGGTTTGCGAAAAGATGCTGGATGCAGTTGGATAGAAGCTGGAGGGGAAAGGTACAATTTCATAGTCGGTGATCAGTTGCTTTCGGAATTACAAAAGATCCGAGAAATGTGGATCAGATTGGAGCAGAAGATAAGAAAAATTGGGTACGTGCCTAATACTAATTCAGTGCTTCATGATCTAGACGAAGAGGAAAAGTTAGAGGTACTACGAGGACACAGCGAAAAGCTTGCAATATCTATTGGCTTATTAAAAACAGCTAAAGGTGTGACATTGAGGATTTGCAAGAATCTGCGTATATGTGGTGACTGTCATAATGCAATTAAGCTGGCTTCTAAGGTTGTTAGCAGGGAGATAATTGTAAGAGATAACAAGCGGTTTCACCATTTCAAGAATGGAAGCTGTTCATGTGGAGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107638.p1 GENE.S_Transcript_107638~~S_Transcript_107638.p1 ORF type:complete len:980 (+),score=156.68,PPR|PF01535.16|4.2e+02,PPR|PF01535.16|3.5e+03,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|0.0007,PPR|PF01535.16|0.083,PPR|PF01535.16|0.00014,PPR|PF01535.16|0.062,PPR|PF01535.16|0.00011,PPR|PF01535.16|20,PPR|PF01535.16|6e-05,PPR|PF01535.16|1.8e+02,PPR|PF01535.16|9.3e-09,PPR|PF01535.16|2e+03,PPR|PF01535.16|15,PPR|PF01535.16|4.8e-07,PPR|PF01535.16|2,PPR|PF01535.16|0.12,PPR|PF01535.16|2.1,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|3e-06,PPR_2|PF13041.2|2.9,PPR_2|PF13041.2|0.0037,PPR_2|PF13041.2|18,PPR_2|PF13041.2|2.2e-05,PPR_2|PF13041.2|41,PPR_2|PF13041.2|3.5e-06,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|1.6e-12,PPR_2|PF13041.2|1.3e+03,PPR_2|PF13041.2|1.4e-07,PPR_2|PF13041.2|0.41,PPR_2|PF13041.2|4.3,PPR_2|PF13041.2|1.1e+02,PPR_3|PF13812.2|1.3e+02,PPR_3|PF13812.2|2.5e+02,PPR_3|PF13812.2|4.5e+03,PPR_3|PF13812.2|44,PPR_3|PF13812.2|22,PPR_3|PF13812.2|0.002,PPR_3|PF13812.2|9.4e+02,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.069,PPR_3|PF13812.2|20,PPR_3|PF13812.2|0.31,PPR_3|PF13812.2|9.9,DYW_deaminase|PF14432.2|1.8e-37,PPR_1|PF12854.3|5.3e+02,PPR_1|PF12854.3|17,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|2.7,PPR_1|PF12854.3|4.2e+02,PPR_1|PF12854.3|0.043,PPR_1|PF12854.3|3.4,PPR_1|PF12854.3|0.0049,PPR_1|PF12854.3|1.6e+02,PPR_1|PF12854.3|0.94,PPR_1|PF12854.3|7.3e+02,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|6.2e+03 S_Transcript_107638:128-3067(+)
MTLFLSPPSSSHQHNHPFHFYSNTQIIPYKKKKTLNSSIKSSLTSFSFSSPKPHQTNPSLPLSKLVSNLCHSHNLTEALSLIQEHSTNFSGNAIQTVEAIGLLIQSCGQLKNIEIGRKVHEIVSTHFGNDIFLNTCLVTMYSSCGSPLNSLIVFDQLKLKNIFIWNAMISSYTKNEFYEDAILMFLELIYETGLEPDNFTLPCVIKSCALLQRARFGKAIHGLAVKMGLVSDVFVSNALVAMYGKFGLVGDSVGVFENMVERNLVSWNSLIRVYSENGFYMESFDVLVRMLEDVEGLGPDVATLVTILPVCAGKGDVEMGKMVHCLAVKLGLLSHEVTMSNALIDMYAKCGFSYEAQMLFEKHENKNVVSWNSLMWNFAREGDAEKVFDLLREMQMVGGEIKINEVTILNVLPVFSNESRLMRLKELHCYSYKHGFLQQELVCNAFIAAYSKCESLSSASSLFSGTEIKTVNSWNALIDGQAQYGDPRKAIDLYLEMTSLGLLPDSFSLRSIVLACSELGLSLSGKEIHGFVVRNGLEKDPFLTVSLLSFYFRCDKSHYARVLFDRIENRNLVSWNAMITGCTQNGLPEEALDVFRYMLVEGIQPNEITVTSLLGACSQLSSLQLGKEIHCFTLKAHLTKDMIVTSSVLDMYAKCGCIQLSRRFFDSLTVRGLPSWTAMISGYGIHGSGNEALVLFEQMQRSGLNPDHFTVIGVLMACSHAGLVKEGMRHFNDMRNLYGIEPKLEHYTCVVDMLARAGHLDYALKLVKNMPMEADSKIWSSLVSFCRIHGNKRLGSIAAKKLIELEPSRVENFVIVSNLLARSGKWDDVRRMRVQMREKGLRKDAGCSWIEAGGERYNFIVGDQLLSELQKIREMWIRLEQKIRKIGYVPNTNSVLHDLDEEEKLEVLRGHSEKLAISIGLLKTAKGVTLRICKNLRICGDCHNAIKLASKVVSREIIVRDNKRFHHFKNGSCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST