Transcript Information: S_Transcript_107848.p1


Annotated TAIR IDAT1G20920.1
Annotated Gene NameP-loop containing nucleoside triphosphate hydrolases superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7285342-7288842 | Forward length=1166
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.309269096052
Replicate 218.026913418945
Replicate 316.593464443781
Condition 2: 8 Hour
Replicate 122.018898945332
Replicate 225.009180389938
Replicate 321.11366476862
Condition 3: 24 Hour
Replicate 120.216877268395
Replicate 217.105342883503
Replicate 317.498220508698


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107848.p1 GENE.S_Transcript_107848~~S_Transcript_107848.p1 ORF type:5prime_partial len:738 (+),score=203.60,DEAD|PF00270.25|2.2e-47,DEAD|PF00270.25|1e+03,Helicase_C|PF00271.27|6.3e-28 S_Transcript_107848:2-2215(+)
TTGAATGGCAATGATAAGAAAGATGATCGAAGCAATGGTGAAGTGCCTAAGAAAAGTTCAAAGAAAGCCCTTGGAAGAATTATTCCTGATGAAGATTCTGATGCTGATTATGAGGATCGGGATGATGACGGGACAAATTTAGAGGATGAAGATGATGATGAGTTCATGAAAAGGGTGAAGAAAACAAAAGCTGAGAGATTGGCCATAGTTGATCATTCAAAGATTGACTATATTAGCTTTAGGAAGAACTTTTACATTGAAGTTAAGGAAATTGCAAGGATGACCCAGGATGATGTGGCTGCTTACAGGAAGGAGCTAGAGCTGAAGGTCCATGGAAAAGATGTCCCAAAACCAATCAAAACCTGGCACCAAACAGGTCTGACTACTAAAATTCTGGAGGTTATAAAAAAGCAAAATTTTGAGAAGCCTATGCCTATCCAAGCACAAGCTTTCCCGGTGATTATGAGTGGCCGTGACTGTATTGGAATTGCAAAAACAGGATCTGGAAAAACATTGGCTTTTGTGTTGCCAATGCTGCGGCACATTAAGGATCAGCCACCGTTGATGCCTGGAGATGGCCCCATAGGTCTTATTATGGCTCCTACTAGAGAGCTAGTCCAGCAGATTCACAGTGATATCAAGAAGTTTGCCAAAGTAGTAAATTTGACCTGTGTTCCCGTGTATGGTGGGTCAGGTGTTGCCCAACAAATAGGTGATCTGAAGAAGGGGGCCGAAATTGTTGTGTGCACTCCTGGTCGAATGATAGATATACTTTGCACAAGTGGTGGGAAAATTACAAATCTTAGAAGAGTTACCTATCTGGTCATGGATGAAGCTGACCGTATGTTTGATATGGGTTTTGAACCTCAGATAACCCGGATTGTCCAGAATATACGACCTGACCGTCAGACTGTGCTCTTCTCTGCAACTTTCCCTCGTCAGGTTGAGGTTTTGGCGAAAAAGGTGCTGAATAAAGCGGTGGAGATTCAGGTTGGTGGAAGGAGTGTTGTGAACAAGGATATAACCCAAATGGTTGAAGTGAGACCTGAATCTGAAAGGTTCCTTAGGCTATTGGAGATTCTTGGGGAGTGGTACGAAAAGGGGAAAATTTTGATCTTTGTCCACACACAAGATAAATGTGATGCCTTGTTTCGGGATTTACTAAAGAGTGGTTATCCTTGCCTCTCTCTTCATGGGGCAAAGGATCAAGGGGACCGTGAATCTACCCTTGCTGATTTCAAGAGTAATGTGTGCAACTTGCTGATTGCAACCAGTATTGCTGCCCGAGGTCTGGATGTGAAAGAGCTTGAACTCGTAATTAACTTTGATGTTCCCAACCATTATGAAGATTACGTGCATCGTGTTGGCCGGACAGGGCGTGCTGGACGTAAGGGTCATGCTATCACTTTTATCTCTGAAGAAGAGGCAAGATATGCTCCTGATCTTTTGAAAGCGTTGGAACTCTCACAGCAGCCTGTTCCAGATGATCTCAAAGCACTTGCGGATGGGTTCATGGCAAAGGTGAAACAGGGACTCGAGCAAGCCCATGGAACTGGTTATGGTGGAAGTGGGTTTAAGTTTGATGAGCAGGAGGATGAAGTACGAAAAGCTGCAAAGAAAGCCCAAGCTAAGGAGTATGGGTTTGAGTATGAAAAATCAGATTCAGAGGACGAAGATGACGAAGTTCGTAAGAGAAGTGATGTTACAATACCAACCCCTCTTCTTGGTGTTGGTGGGCAAGCGCCAGATGCCGGCCTTCCTGCATCAGTGCCAGGTGCAATTGGCACAGTGCCTGCGTCTATTCTGTCCATTGTAGGAGATAATAATCCAGCAAGGGCAAATGCACTTGCAGCTGCAATGAAGGTTCAGCAGAGTCTGGCTAAGCTCCAAGCTGATGCTATGCCTGAGCATTATGAGGCAGAGCTGGAGATCAATGATTTCCCCCAGAATGCTCGCTGGAAGGTTACGCATAAGGAGACTCTGGGTCCCATTTCTGAATGGACAGGAGCTGCCATTACAACCAGGGGACAGTACTTTCCCCCAGGGAAGATTCCTGGTCCTGGAGAACGCAAACTCTACTTGTTCATTGAGGGACGCACTGAGCATTCAGTTAAGACGGCTAAAGCTGAATTGAAGCGTGTCTTGGAGGATATCACGACACAAGCCATATCACTTCCAGGTGGTGCTCAACCAGGCAGATATTCTATTACCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107848.p1 GENE.S_Transcript_107848~~S_Transcript_107848.p1 ORF type:5prime_partial len:738 (+),score=203.60,DEAD|PF00270.25|2.2e-47,DEAD|PF00270.25|1e+03,Helicase_C|PF00271.27|6.3e-28 S_Transcript_107848:2-2215(+)
LNGNDKKDDRSNGEVPKKSSKKALGRIIPDEDSDADYEDRDDDGTNLEDEDDDEFMKRVKKTKAERLAIVDHSKIDYISFRKNFYIEVKEIARMTQDDVAAYRKELELKVHGKDVPKPIKTWHQTGLTTKILEVIKKQNFEKPMPIQAQAFPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLMPGDGPIGLIMAPTRELVQQIHSDIKKFAKVVNLTCVPVYGGSGVAQQIGDLKKGAEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEVLAKKVLNKAVEIQVGGRSVVNKDITQMVEVRPESERFLRLLEILGEWYEKGKILIFVHTQDKCDALFRDLLKSGYPCLSLHGAKDQGDRESTLADFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGHAITFISEEEARYAPDLLKALELSQQPVPDDLKALADGFMAKVKQGLEQAHGTGYGGSGFKFDEQEDEVRKAAKKAQAKEYGFEYEKSDSEDEDDEVRKRSDVTIPTPLLGVGGQAPDAGLPASVPGAIGTVPASILSIVGDNNPARANALAAAMKVQQSLAKLQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGKIPGPGERKLYLFIEGRTEHSVKTAKAELKRVLEDITTQAISLPGGAQPGRYSIT*

Click here to download the sequence:
Link to NCBI Protein BLAST