Transcript Information: S_Transcript_107928.p1


Annotated TAIR IDAT5G02820.1
Annotated Gene NameSpo11/DNA topoisomerase VI, subunit A protein
Annotated Gene Symbol(s)RHL2, BIN5
Annotation TypeOrtholog
Chromosome Positionchr5:642658-644123 | Forward length=427
E-Value2E-238
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4705037791432
Replicate 26.7732265910204
Replicate 36.1198243889149
Condition 2: 8 Hour
Replicate 17.3170639462849
Replicate 28.3326298545257
Replicate 38.1798963721147
Condition 3: 24 Hour
Replicate 16.706329920363
Replicate 26.2415011564659
Replicate 35.7503983858165


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107928.p1 GENE.S_Transcript_107928~~S_Transcript_107928.p1 ORF type:5prime_partial len:443 (+),score=67.23,TP6A_N|PF04406.10|3e-21 S_Transcript_107928:1-1329(+)
CCCAGTTCCTCCCATTCCCGCCACTCATACTCCCTCCCTCACTCTCCACTCTCCAAAATGTCCGAAGCCAACCGCAAACGCCGCCGTTCCGACAACCCCTCTACCTTCTCCTCCGCCGCAACCACCACCGCCGAAGACGCCAAGATCCTCAAAACCCTAACAGAATTCTCAGAATCCATCAAAAATCCCTCATCAAAAAACCCCCCCAAACCCCTAACCCTAGCAGACATCTCCCCAACACTCTCCTCCACCTGCCGCGAAGTCACCGATCTTTCTCTCTCCTCCGTCCAATCCTCAATCGAAACCCTAATCCTCTCTCTAACCAAATCCCTCCTCTCCGGTCACGGCTTCTCCTTCTCGATCCCCTCCCGGTCCTCCTCTAACCACCTCTACATACCCGAACTCGACCGCATTGTCTTGAAGGACAAATCCTCCAACCGCCCCTTCGCCTCCGTCTCCACCGTCCGCAAAGCTACCATCACCGCCCGTATCATCTCTCTCATCCACCAGCTCTGCCAGAAGAGCATCCACGTCACCAAGCGTGACCTCTTCTACACTGACGTCAAGCTCTTCCAGGACCAGACTCAGAGCGACGCCGTTTTGGATGACGTCTCGTGTCTCCTCGGGTGCACTCGGTCTAGCCTCAATGTCATCGCCTCCGAAAAGGGGGTGGTGGTTGGGAGGTTGAGTTTTAGTGATAATGGTGACTTGATTGATTGTACTAGAATGGGGGTTGGTGGGAAAGCTATCCCCCCGAATATCGATCGCGTTGGTGATATCCAAAGTGATGCCCTGTTTATCCTTCTTGTTGAGAAGGATGCTGCTTATATTCGGCTTGCTGAGGATCGGTTCTATAACCGGTTCCCTTGTATTATCCTGACTGCTAAGGGGCAGCCTGATGTCGCAACCAGGTTGTTCTTGAGGAAGTTGAAGTTGGAGCTCAAGCTTCCGGTTGTGGCCCTTGTTGATAGTGATCCATATGGGTTGAAGATATTGTCGGTTTATGGATGTGGGTCGAAGAATATGTCCTATGATAGTGCTAATTTGACTACTCCTGATATCAAGTGGCTAGGAGTTCGGCCTAGTGATCTGGATAAGTATAAGATACCGGAGCAGTGCAGGTTGCTGATGACAGAGCAGGATATTAAGACTGGGAAAGATATGTTGGAGGAGGATTTTGTGAAGAAGAATCCCGAATGGGTTAAGGAGTTGGAATTGATGGTTAAGACTAAGCAAAAGGCTGAGATTCAGGCTCTTAGTGCTTTTGGATTTCAGTACTTGACTGAGACTTATTTGCCTCTTAAGTTGAAGCAACGCGATTGGGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107928.p1 GENE.S_Transcript_107928~~S_Transcript_107928.p1 ORF type:5prime_partial len:443 (+),score=67.23,TP6A_N|PF04406.10|3e-21 S_Transcript_107928:1-1329(+)
PSSSHSRHSYSLPHSPLSKMSEANRKRRRSDNPSTFSSAATTTAEDAKILKTLTEFSESIKNPSSKNPPKPLTLADISPTLSSTCREVTDLSLSSVQSSIETLILSLTKSLLSGHGFSFSIPSRSSSNHLYIPELDRIVLKDKSSNRPFASVSTVRKATITARIISLIHQLCQKSIHVTKRDLFYTDVKLFQDQTQSDAVLDDVSCLLGCTRSSLNVIASEKGVVVGRLSFSDNGDLIDCTRMGVGGKAIPPNIDRVGDIQSDALFILLVEKDAAYIRLAEDRFYNRFPCIILTAKGQPDVATRLFLRKLKLELKLPVVALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGVRPSDLDKYKIPEQCRLLMTEQDIKTGKDMLEEDFVKKNPEWVKELELMVKTKQKAEIQALSAFGFQYLTETYLPLKLKQRDWV*

Click here to download the sequence:
Link to NCBI Protein BLAST