Transcript Information: S_Transcript_107944.p1


Annotated TAIR IDAT3G26420.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Annotated Gene Symbol(s)ATRZ-1A
Annotation TypeOrtholog
Chromosome Positionchr3:9671953-9673055 | Forward length=245
E-Value5.9E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1121.02579133142
Replicate 2109.87619402651
Replicate 3121.12193737444
Condition 2: 8 Hour
Replicate 1116.18952740247
Replicate 2113.01334650148
Replicate 3120.87438979174
Condition 3: 24 Hour
Replicate 1102.54959194196
Replicate 2108.64239835011
Replicate 3103.29027708762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_107944.p1 GENE.S_Transcript_107944~~S_Transcript_107944.p1 ORF type:5prime_partial len:252 (+),score=68.04,RRM_1|PF00076.18|6.7e-21,RRM_6|PF14259.2|2e-11,RRM_5|PF13893.2|4.4e+03,RRM_5|PF13893.2|2.2e-07,zf-CCHC|PF00098.19|1.3e-07,zf-CCHC|PF00098.19|7e+03 S_Transcript_107944:2-757(+)
GTAGTCCAAGTCTCATCCAGTGGATTAGTTAGATACTTTGTAGGCGTAAGTGTGCTGTTTGTTGGGTTCACATTCTCTAGGGTTACTTCCTTCAAGTCAGCTCTCGAGGTAAAAATGAGTGATGCGGATGAGTATCGTTGCTTCGTTGGAAGCCTGTCATGGTCTACTACTGACAGAGGCCTGAAAGAGGCATTCGAGAAATTTGGTCGTCTTCTTGAGGCAAAGGTTGTTTTAGACAAGTTCTCTGGACGATCTCGTGGATTTGGTTTTGTTTCTTTTGATGATAGGAGAGCTATGGAAGAAGCTATTGAGGCAATGAATGGCATGGATTTGGATGGACGTCCTATCACTGTGGAAAGAGCTCAGCCTAGCCAAGGCGGCTCTAGGGACCGAGACGGATATTATGATCGTGACCGTGGCCGTGATCGTGATCGTGACCGTCCTCGTGGTTATGGTGGAGGGTCACGAGGAGGAGGTGGAGGTGGTGGTGAGTGTTTCAAATGTGGCAGGCCTGGTCATTTTGCTCGTGAATGCCCTGATGATGGAGGTAGGGGTGGTGGTAGGTATGGTGGCAGAGGAGACCGTAAAGGTGGTGGTGGTCACTATGGACCTGATCGTGGTGGGGATCGCTATGGTGGCGGTGGCGGTGGTGGACGTTACAGAGATTCTGGTAGTCGTGGAGGATCTGGAAGTGATAGGTATGGCCGTGATCGTTCTGGTCCATATGAGCGACCTGGGGCTGGTGGTTACCGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_107944.p1 GENE.S_Transcript_107944~~S_Transcript_107944.p1 ORF type:5prime_partial len:252 (+),score=68.04,RRM_1|PF00076.18|6.7e-21,RRM_6|PF14259.2|2e-11,RRM_5|PF13893.2|4.4e+03,RRM_5|PF13893.2|2.2e-07,zf-CCHC|PF00098.19|1.3e-07,zf-CCHC|PF00098.19|7e+03 S_Transcript_107944:2-757(+)
VVQVSSSGLVRYFVGVSVLFVGFTFSRVTSFKSALEVKMSDADEYRCFVGSLSWSTTDRGLKEAFEKFGRLLEAKVVLDKFSGRSRGFGFVSFDDRRAMEEAIEAMNGMDLDGRPITVERAQPSQGGSRDRDGYYDRDRGRDRDRDRPRGYGGGSRGGGGGGGECFKCGRPGHFARECPDDGGRGGGRYGGRGDRKGGGGHYGPDRGGDRYGGGGGGGRYRDSGSRGGSGSDRYGRDRSGPYERPGAGGYR*

Click here to download the sequence:
Link to NCBI Protein BLAST