Transcript Information: S_Transcript_108009.p1


Annotated TAIR IDAT5G05270.1
Annotated Gene NameChalcone-flavanone isomerase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1563492-1564827 | Forward length=209
E-Value2.7E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 186.492254014337
Replicate 272.128350476491
Replicate 354.884873248792
Condition 2: 8 Hour
Replicate 141.830573314376
Replicate 233.342659030362
Replicate 333.203531846221
Condition 3: 24 Hour
Replicate 164.904509601862
Replicate 279.75918304753
Replicate 372.63463749358


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_108009.p1 GENE.S_Transcript_108009~~S_Transcript_108009.p1 ORF type:complete len:208 (+),score=56.49,Chalcone|PF02431.11|2.8e-28 S_Transcript_108009:243-866(+)
ATGGGCAGTGATGCTATGGTGGATGACATTGCTTTTGCTCCAGAATTCACATTGACGAAACCACTTACTCTATTGGGTTATGGCTGCACAGAGCTTGAAATTCACTTCTTGCAAATAAAGCACACTGCAATTGGAGTTTACACAGAGCCTGCAGTGATAGAACATCTGCAGAAATGGAAGGGTAAATCAGGAAAAGAGCTCGCCGAGGATGATGAATTTTACGAAGCTCTTGCAGCTGCTCCAGTAGAAACTGTAGTGAAAGTAGTGGTGATAAAGGAAATCAAGGCCTCACAGTACGGAACACAGCTTGAGGGTGCTGTTAGGGACCGTTTGGCGGCCGTTGATAAGTATGAAGAAGAAGAGGAAATTGCTCTTGAGAAAGTTGCTCAGTTCTTCCCCACCAAATACCTTAAGAAAACTGCCTCCTTCACTTTCAAGTTCTTCGTATCAGGCGAAGCTGAGATCGTGCTGACAACAGACGAGAAAGACGAATCGAAGATAGCAGTGGAGAACAAAAACGTGGTGGAGATGATCAAGAATTGGTATTTGGGTGGAAGCAGGGGAGTTTCTCCTTCAACCATAGAGTCCTTGGCCAACAACATTTCAGCTGAGTTATCCAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_108009.p1 GENE.S_Transcript_108009~~S_Transcript_108009.p1 ORF type:complete len:208 (+),score=56.49,Chalcone|PF02431.11|2.8e-28 S_Transcript_108009:243-866(+)
MGSDAMVDDIAFAPEFTLTKPLTLLGYGCTELEIHFLQIKHTAIGVYTEPAVIEHLQKWKGKSGKELAEDDEFYEALAAAPVETVVKVVVIKEIKASQYGTQLEGAVRDRLAAVDKYEEEEEIALEKVAQFFPTKYLKKTASFTFKFFVSGEAEIVLTTDEKDESKIAVENKNVVEMIKNWYLGGSRGVSPSTIESLANNISAELSK*

Click here to download the sequence:
Link to NCBI Protein BLAST